RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 LRP2BPQ9P2M1 347 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 SAR1BQ9Y6B6 198 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 IQUBQ8NA54 791 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 RUFY1Q96T51 708 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 STRN4Q9NRL3 753 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 TRMT112Q9UI30 125 aaKnown RBP12.56□□□□□ -0.4
PTPN7-201ENST00000309017 TFR2Q9UP52 801 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 V9GY48 417 aaPredicted RBP12.56□□□□□ -0.4
PTPN7-201ENST00000309017 A0A087X0B3 334 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 UQCRFS1P1P0C7P4 283 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 MATR3P43243 847 aaKnown RBP eCLIP12.56□□□□□ -0.4
PTPN7-201ENST00000309017 HSPA2P54652 639 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 GNL3LQ9NVN8 582 aaKnown RBP12.56□□□□□ -0.4
PTPN7-201ENST00000309017 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 FBXO3Q9UK99 471 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 MEGF6O75095 1541 aa12.56□□□□□ -0.4
PTPN7-201ENST00000309017 LRRC31Q6UY01 552 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 AATFQ9NY61 560 aaKnown RBP eCLIP12.55□□□□□ -0.4
PTPN7-201ENST00000309017 MACROD2A1Z1Q3 448 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 NDUFA10O95299 355 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 FAM76AQ8TAV0 307 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 EEF2KMTQ96G04 330 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 ABCF2Q9UG63 623 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 TRIM21P19474 475 aaKnown RBP12.55□□□□□ -0.4
PTPN7-201ENST00000309017 MCM7P33993 719 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 CKAP4Q07065 602 aaKnown RBP12.55□□□□□ -0.4
PTPN7-201ENST00000309017 CUL4BQ13620 913 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 TRIM14Q14142 442 aa12.55□□□□□ -0.4
PTPN7-201ENST00000309017 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
PTPN7-201ENST00000309017 RNF41Q9H4P4 317 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-201ENST00000309017 EPB41L4AQ9HCS5 686 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-201ENST00000309017 IQSEC3Q9UPP2 1182 aaPredicted RBP12.55□□□□□ -0.4
PTPN7-201ENST00000309017 SNAP23O00161 211 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 KRT86O43790 486 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 TTC38Q5R3I4 469 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 OR8K1Q8NGG5 319 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 TRIM47Q96LD4 638 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 C5P01031 1676 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 PPFIA4O75335 1185 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 PCCAP05165 728 aaPredicted RBP12.54□□□□□ -0.4
PTPN7-201ENST00000309017 PTGDRQ13258 359 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 CDKAL1Q5VV42 579 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 ICE2Q659A1 982 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 TTLL11Q8NHH1 800 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 FERMT2Q96AC1 680 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 MMS19Q96T76 1030 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 GOLGA6CA6NDK9 693 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 PPP1R3GB7ZBB8 358 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 GOLGA6DP0CG33 693 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 SPATA5Q8NB90 893 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 JAKMIP2Q96AA8 810 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 HAUS4Q9H6D7 363 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 GOLGA6AQ9NYA3 693 aa12.54□□□□□ -0.4
PTPN7-201ENST00000309017 IRS4O14654 1257 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-201ENST00000309017 PDE8BO95263 885 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 BMP15O95972 392 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 ATP1A1P05023 1023 aaKnown RBP12.53□□□□□ -0.4
PTPN7-201ENST00000309017 IDEP14735 1019 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 NLRP5P59047 1200 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 DPYDQ12882 1025 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 FKBP15Q5T1M5 1219 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 CATIPQ7Z7H3 387 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 ZBTB38Q8NAP3 1195 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-201ENST00000309017 PLEKHG2Q9H7P9 1386 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 SEMA3EO15041 775 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 SLC5A1P13866 664 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 CCT5P48643 541 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 USP14P54578 494 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 TCP11X2Q5H9J9 407 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 APTXQ7Z2E3 356 aaKnown RBP12.53□□□□□ -0.4
PTPN7-201ENST00000309017 ISCA1Q9BUE6 129 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 RIPOR2Q9Y4F9 1068 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 SHTN1A0MZ66 631 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 GOLGA6BA6NDN3 693 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 RNF225M0QZC1 329 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-201ENST00000309017 EBAG9O00559 213 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 ATF3P18847 181 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 CYLC1P35663 651 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-201ENST00000309017 GGCXP38435 758 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 KRT83P78385 493 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 CT47A1Q5JQC4 288 aaPredicted RBP12.53□□□□□ -0.4
PTPN7-201ENST00000309017 IQCEQ6IPM2 695 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 PIK3AP1Q6ZUJ8 805 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 LCORLQ8N3X6 602 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 ESR2Q92731 530 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 PLIN2Q99541 437 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 GDAQ9Y2T3 454 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 TNKSO95271 1327 aa12.53□□□□□ -0.4
PTPN7-201ENST00000309017 TTC26A0AVF1 554 aa12.52□□□□□ -0.4
PTPN7-201ENST00000309017 STAT6P42226 847 aa12.52□□□□□ -0.4
PTPN7-201ENST00000309017 LIG3P49916 1009 aa12.52□□□□□ -0.4
PTPN7-201ENST00000309017 IFIT1BQ5T764 474 aaKnown RBP12.52□□□□□ -0.4
PTPN7-201ENST00000309017 PACS2Q86VP3 889 aa12.52□□□□□ -0.4
PTPN7-201ENST00000309017 GPIHBP1Q8IV16 184 aa12.52□□□□□ -0.4
PTPN7-201ENST00000309017 EHBP1Q8NDI1 1231 aa12.52□□□□□ -0.4
PTPN7-201ENST00000309017 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.4
PTPN7-201ENST00000309017 H0YHG0 523 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms