RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 ADCY9O60503 1353 aa6.47□□□□□ -1.37
CKS1B-201ENST00000308987 FAM95CA0A1B0GW59 222 aa6.47□□□□□ -1.37
CKS1B-201ENST00000308987 A6NJR5 290 aa6.47□□□□□ -1.37
CKS1B-201ENST00000308987 FAM196BA6NMK8 535 aa6.47□□□□□ -1.37
CKS1B-201ENST00000308987 POLD1P28340 1107 aa6.47□□□□□ -1.37
CKS1B-201ENST00000308987 HDGFL2Q7Z4V5 671 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-201ENST00000308987 C12orf50Q8NA57 414 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-201ENST00000308987 PIK3R5Q8WYR1 880 aa6.47□□□□□ -1.37
CKS1B-201ENST00000308987 METTL22Q9BUU2 404 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-201ENST00000308987 CCNL1Q9UK58 526 aaPredicted RBP6.47□□□□□ -1.37
CKS1B-201ENST00000308987 ST20-MTHFSA0A0A6YYL1 179 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 FYB1O15117 783 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 CYP27B1O15528 508 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 SBF1O95248 1867 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 CYP2E1P05181 493 aaPredicted RBP6.46□□□□□ -1.38
CKS1B-201ENST00000308987 ADMP35318 185 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 CABP4P57796 275 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 FAM26DQ5JW98 314 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 PAOXQ6QHF9 649 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 PUS7Q96PZ0 661 aaKnown RBP6.46□□□□□ -1.38
CKS1B-201ENST00000308987 TERF2IPQ9NYB0 399 aa6.46□□□□□ -1.38
CKS1B-201ENST00000308987 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.38
CKS1B-201ENST00000308987 VIRMAQ69YN4 1812 aaKnown RBP6.46□□□□□ -1.38
CKS1B-201ENST00000308987 COL5A3P25940 1745 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-201ENST00000308987 NCAPD2Q15021 1401 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 SMG6Q86US8 1419 aaKnown RBP6.45□□□□□ -1.38
CKS1B-201ENST00000308987 BRD2P25440 801 aaKnown RBP6.45□□□□□ -1.38
CKS1B-201ENST00000308987 AMPHP49418 695 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 HSP90AB2PQ58FF8 381 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 HGSNATQ68CP4 663 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 NCAPG2Q86XI2 1143 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 SLC7A3Q8WY07 619 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 COG3Q96JB2 828 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 SAP130Q9H0E3 1048 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 GGNBP2Q9H3C7 697 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 WWC3Q9ULE0 1092 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 CICQ96RK0 1608 aaPredicted RBP6.45□□□□□ -1.38
CKS1B-201ENST00000308987 CCDC88AQ3V6T2 1871 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 C4AP0C0L4 1744 aa6.45□□□□□ -1.38
CKS1B-201ENST00000308987 RTL1A6NKG5 1358 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 PALLDQ8WX93 1383 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 USP47Q96K76 1375 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 ARFGEF1Q9Y6D6 1849 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 GRIN3BO60391 1043 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 TIAF1O95411 115 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 FKBP5Q13451 457 aaPredicted RBP6.44□□□□□ -1.38
CKS1B-201ENST00000308987 CDPF1Q6NVV7 123 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 SMG8Q8ND04 991 aaKnown RBP6.44□□□□□ -1.38
CKS1B-201ENST00000308987 FBLIM1Q8WUP2 373 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 PRIMPOLQ96LW4 560 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 TMPRSS13Q9BYE2 586 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 ABI2Q9NYB9 513 aaPredicted RBP6.44□□□□□ -1.38
CKS1B-201ENST00000308987 FNDC3AQ9Y2H6 1198 aaKnown RBP6.44□□□□□ -1.38
CKS1B-201ENST00000308987 CD2APQ9Y5K6 639 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 KIF7Q2M1P5 1343 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 RNF123Q5XPI4 1314 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 INSRP06213 1382 aa6.44□□□□□ -1.38
CKS1B-201ENST00000308987 FAM170BA6NMN3 283 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 PRMT3O60678 531 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 FARP2O94887 1054 aaPredicted RBP6.43□□□□□ -1.38
CKS1B-201ENST00000308987 USP11P51784 963 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 MPRIPQ6WCQ1 1025 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 ZAR1Q86SH2 424 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 LINC00116Q8NCU8 138 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 ZNF526Q8TF50 670 aaPredicted RBP6.43□□□□□ -1.38
CKS1B-201ENST00000308987 PIGBQ92521 554 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 TBC1D32Q96NH3 1257 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 MKNK1Q9BUB5 465 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 MRS2Q9HD23 443 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 FAM13BQ9NYF5 915 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 IGSF1Q8N6C5 1336 aa6.43□□□□□ -1.38
CKS1B-201ENST00000308987 ZNF831Q5JPB2 1677 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 DRD2P14416 443 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 ARL4DP49703 201 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 C19orf57Q0VDD7 668 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 ITPK1Q13572 414 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 SUGCTQ9HAC7 445 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 CYP4F12Q9HCS2 524 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 PRKAG2Q9UGJ0 569 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 ZC3H7BQ9UGR2 993 aaKnown RBP6.42□□□□□ -1.38
CKS1B-201ENST00000308987 CGNL1Q0VF96 1302 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 ADAMTS7Q9UKP4 1686 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 FLT4P35916 1363 aa6.42□□□□□ -1.38
CKS1B-201ENST00000308987 PXDNLA1KZ92 1463 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 AFDNP55196 1824 aaKnown RBP6.41□□□□□ -1.38
CKS1B-201ENST00000308987 BIN1O00499 593 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 HSPA6P17066 643 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 RAPGEF4Q8WZA2 1011 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 GATA6Q92908 595 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 ASAP1Q9ULH1 1129 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 NOVA2Q9UNW9 492 aaKnown RBP6.41□□□□□ -1.38
CKS1B-201ENST00000308987 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.41□□□□□ -1.38
CKS1B-201ENST00000308987 PCDH11XQ9BZA7 1347 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 PCDH11YQ9BZA8 1340 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 WDR90Q96KV7 1748 aa6.41□□□□□ -1.38
CKS1B-201ENST00000308987 TJP1Q07157 1748 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 NFKBIEO00221 500 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 DLGAP3O95886 979 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 ACPPP15309 386 aa6.4□□□□□ -1.38
CKS1B-201ENST00000308987 PKN1Q16512 942 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms