RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 USP44Q9H0E7 712 aa11.28□□□□□ -0.6
PRPF8-201ENST00000304992 NSRP1Q9H0G5 558 aaKnown RBP11.28□□□□□ -0.6
PRPF8-201ENST00000304992 CTTNBP2NLQ9P2B4 639 aa11.28□□□□□ -0.6
PRPF8-201ENST00000304992 KDRP35968 1356 aa11.28□□□□□ -0.6
PRPF8-201ENST00000304992 TRMT44Q8IYL2 757 aaKnown RBP11.27□□□□□ -0.6
PRPF8-201ENST00000304992 TSGA10Q9BZW7 698 aa11.27□□□□□ -0.6
PRPF8-201ENST00000304992 PRAMEF22A3QJZ6 481 aa11.27□□□□□ -0.6
PRPF8-201ENST00000304992 PPP1R2P41236 205 aa11.27□□□□□ -0.6
PRPF8-201ENST00000304992 TNNC1P63316 161 aa11.27□□□□□ -0.6
PRPF8-201ENST00000304992 EAF2Q96CJ1 260 aaPredicted RBP11.27□□□□□ -0.6
PRPF8-201ENST00000304992 FAM193BQ96PV7 902 aaPredicted RBP11.27□□□□□ -0.6
PRPF8-201ENST00000304992 SLFN13Q68D06 897 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 GPBP1Q86WP2 473 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 MRPL11Q9Y3B7 192 aaKnown RBP11.27□□□□□ -0.61
PRPF8-201ENST00000304992 ZNF335Q9H4Z2 1342 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-201ENST00000304992 TBC1D10BQ4KMP7 808 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-201ENST00000304992 VWA3BQ502W6 1294 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 FMNL3Q8IVF7 1028 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 NELFBQ8WX92 580 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 ZEB2O60315 1214 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 GDF11O95390 407 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 STMN4Q9H169 189 aaPredicted RBP11.27□□□□□ -0.61
PRPF8-201ENST00000304992 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.61
PRPF8-201ENST00000304992 SEPT12Q8IYM1 358 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 TNKSO95271 1327 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 DISP1Q96F81 1524 aa11.27□□□□□ -0.61
PRPF8-201ENST00000304992 POSTNQ15063 836 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 CCT6BQ92526 530 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 ATP8A2Q9NTI2 1148 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 STK24Q9Y6E0 443 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 XDHP47989 1333 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 DSCC1Q9BVC3 393 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 PFDN4Q9NQP4 134 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 RTEL1Q9NZ71 1219 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 ARHGEF12Q9NZN5 1544 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 CFAP43Q8NDM7 1665 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 LIG4P49917 911 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 VAV2P52735 878 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 CCDC125Q86Z20 511 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 AOX1Q06278 1338 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 OPA1O60313 960 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 BSPRYQ5W0U4 402 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 CASC4Q6P4E1 433 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 NLRC4Q9NPP4 1024 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 PCDHA12Q9UN75 941 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 MLH3Q9UHC1 1453 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 PALM3A6NDB9 673 aaPredicted RBP11.26□□□□□ -0.61
PRPF8-201ENST00000304992 ZNF365Q70YC5 407 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 MIGA2Q7L4E1 593 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 SMC6Q96SB8 1091 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 METP08581 1390 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 KCTD1Q719H9 257 aa11.26□□□□□ -0.61
PRPF8-201ENST00000304992 PTPRTO14522 1441 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 STK10O94804 968 aaKnown RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 SLU7O95391 586 aaKnown RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 ADD1P35611 737 aaKnown RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 CYP4A11Q02928 519 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 ZBTB8OSQ8IWT0 167 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 NSMCE1Q8WV22 266 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 GPR101Q96P66 508 aaPredicted RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 FAM207AQ9NSI2 230 aaPredicted RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 ANKFY1Q9P2R3 1169 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 LRRIQ4A6NIV6 560 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 PTH1RQ03431 593 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 BLIDQ8IZY5 108 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 PNOCQ13519 176 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 KCTD2Q14681 263 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 PLA2G4DQ86XP0 818 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 TRIM7Q9C029 511 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 CSRNP2Q9H175 543 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 K7ENM7 598 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 PPP2R5BQ15173 497 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 SEPT14Q6ZU15 432 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 PALD1Q9ULE6 856 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 NR1I2O75469 434 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 BCRP11274 1271 aa11.25□□□□□ -0.61
PRPF8-201ENST00000304992 XRCC6P12956 609 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 DDX25Q9UHL0 483 aaKnown RBP11.25□□□□□ -0.61
PRPF8-201ENST00000304992 PDE8BO95263 885 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 DLATP10515 647 aaKnown RBP11.24□□□□□ -0.61
PRPF8-201ENST00000304992 POLGP54098 1239 aaPredicted RBP11.24□□□□□ -0.61
PRPF8-201ENST00000304992 DYNLL1P63167 89 aaKnown RBP11.24□□□□□ -0.61
PRPF8-201ENST00000304992 FANCCQ00597 558 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 EEPD1Q7L9B9 569 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 CCDC26Q8TAB7 109 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 SERTAD1Q9UHV2 236 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 RRP9O43818 475 aaKnown RBP11.24□□□□□ -0.61
PRPF8-201ENST00000304992 FGAP02671 866 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 HSPD1P10809 573 aaKnown RBP11.24□□□□□ -0.61
PRPF8-201ENST00000304992 SLC9C1Q4G0N8 1177 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 UBL4BQ8N7F7 174 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 ADPGKQ9BRR6 497 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 NFE2L3Q9Y4A8 694 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 PCDHA1Q9Y5I3 950 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 KLHL30Q0D2K2 578 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 SCYL2Q6P3W7 929 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 TBC1D31Q96DN5 1066 aa11.24□□□□□ -0.61
PRPF8-201ENST00000304992 P4HA1P13674 534 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms