RNA–Protein interactions for RNA: ENST00000303795.8

APLF-201, Transcript of aprataxin and PNKP like factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APLF, Length 3,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-201ENST00000303795 CDC27P30260 824 aa13.4□□□□□ -0.26
APLF-201ENST00000303795 ZNF76P36508 570 aa13.4□□□□□ -0.26
APLF-201ENST00000303795 DYMQ7RTS9 669 aa13.4□□□□□ -0.26
APLF-201ENST00000303795 CRACR2AQ9BSW2 395 aa13.4□□□□□ -0.26
APLF-201ENST00000303795 FAM107BQ9H098 131 aa13.4□□□□□ -0.26
APLF-201ENST00000303795 CTNND2Q9UQB3 1225 aa13.4□□□□□ -0.26
APLF-201ENST00000303795 CARMIL3Q8ND23 1372 aa13.4□□□□□ -0.26
APLF-201ENST00000303795 NWD2Q9ULI1 1742 aa13.4□□□□□ -0.27
APLF-201ENST00000303795 KIAA0754O94854 1291 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 ASIC1P78348 528 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 PLS1Q14651 629 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 ERFEQ4G0M1 354 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 RUFY1Q96T51 708 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 PARD6BQ9BYG5 372 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 ZNHIT6Q9NWK9 470 aaKnown RBP13.39□□□□□ -0.27
APLF-201ENST00000303795 CEP131Q9UPN4 1083 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 CTDP1Q9Y5B0 961 aaPredicted RBP13.39□□□□□ -0.27
APLF-201ENST00000303795 KIF5CO60282 957 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 SCNN1DP51172 638 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 MYL5Q02045 173 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 LONRF2Q1L5Z9 754 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 ZNF526Q8TF50 670 aaPredicted RBP13.39□□□□□ -0.27
APLF-201ENST00000303795 EPSTI1Q96J88 318 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.39□□□□□ -0.27
APLF-201ENST00000303795 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
APLF-201ENST00000303795 MAP3K15Q6ZN16 1313 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 KIF28PB7ZC32 967 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 TUBB4AP04350 444 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 HIBADHP31937 336 aaKnown RBP13.39□□□□□ -0.27
APLF-201ENST00000303795 OXER1Q8TDS5 423 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 PCDHB6Q9Y5E3 794 aa13.39□□□□□ -0.27
APLF-201ENST00000303795 HEG1Q9ULI3 1381 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 N4BP1O75113 896 aaKnown RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 PCCAP05165 728 aaPredicted RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 TRIM21P19474 475 aaKnown RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 ZNF569Q5MCW4 686 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 RBM26Q5T8P6 1007 aaKnown RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 SLC44A5Q8NCS7 719 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 DONSONQ9NYP3 566 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 DACH1Q9UI36 760 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 TXKP42681 527 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 CHMP4BP1P59074 171 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 MRPS25P82663 173 aaKnown RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 PPARAQ07869 468 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 STIM1Q13586 685 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 RNF187Q5TA31 235 aaPredicted RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 PPM1EQ8WY54 764 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 RTCBQ9Y3I0 505 aaKnown RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 WDR17Q8IZU2 1322 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 CEMIPQ8WUJ3 1361 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 UFL1O94874 794 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 INHBEP58166 350 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 CCDC91Q7Z6B0 441 aa13.38□□□□□ -0.27
APLF-201ENST00000303795 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
APLF-201ENST00000303795 USP17L8P0C7I0 530 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 USP49Q70CQ1 688 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 WDR24Q96S15 920 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 JADE2Q9NQC1 790 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 INTS13Q9NVM9 706 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 MED23Q9ULK4 1368 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 ZNF609O15014 1411 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 PRPF6O94906 941 aaKnown RBP13.37□□□□□ -0.27
APLF-201ENST00000303795 LDHBP07195 334 aaKnown RBP13.37□□□□□ -0.27
APLF-201ENST00000303795 PRDX5P30044 214 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 MAP2K2P36507 400 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 ADALQ6DHV7 355 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 FANCBQ8NB91 859 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 SALL1Q9NSC2 1324 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 DOK7Q18PE1 504 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 GPR161Q8N6U8 529 aaKnown RBP13.37□□□□□ -0.27
APLF-201ENST00000303795 LINC00301Q8NCQ3 95 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 FAM212AQ96EL1 285 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 FRMPD2Q68DX3 1309 aaPredicted RBP13.37□□□□□ -0.27
APLF-201ENST00000303795 USP31Q70CQ4 1352 aa13.37□□□□□ -0.27
APLF-201ENST00000303795 USP54Q70EL1 1684 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 TMEM232C9JQI7 657 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 PLEKHA8P1O95397 391 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 KRT2P35908 639 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 USP8P40818 1118 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 RPS8P62241 208 aaKnown RBP13.36□□□□□ -0.27
APLF-201ENST00000303795 UBXN1Q04323 297 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 HDXQ7Z353 690 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 CACNA2D4Q7Z3S7 1137 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 CNNM2Q9H8M5 875 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 SAMSN1Q9NSI8 373 aaKnown RBP13.36□□□□□ -0.27
APLF-201ENST00000303795 RCOR1Q9UKL0 485 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 CCDC172P0C7W6 258 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 TBX2Q13207 712 aaPredicted RBP13.36□□□□□ -0.27
APLF-201ENST00000303795 BRAPQ7Z569 592 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 CEP89Q96ST8 783 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 BAG1Q99933 345 aaPredicted RBP13.36□□□□□ -0.27
APLF-201ENST00000303795 CEP83Q9Y592 693 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 SOS2Q07890 1332 aaPredicted RBP13.36□□□□□ -0.27
APLF-201ENST00000303795 PARP4Q9UKK3 1724 aaKnown RBP13.36□□□□□ -0.27
APLF-201ENST00000303795 MACROD2A1Z1Q3 448 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 INF2Q27J81 1249 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 MAEAQ7L5Y9 396 aa13.36□□□□□ -0.27
APLF-201ENST00000303795 MSANTD4Q8NCY6 345 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms