RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FAM160A1Q05DH4 1040 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 SLC39A14Q15043 492 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 JDP2Q8WYK2 163 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 LZTS2Q9BRK4 669 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 NOL7Q9UMY1 257 aaKnown RBP16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 RAD21O60216 631 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 GOLGA8HP0CJ92 632 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 AKR1B1P15121 316 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 RSBN1LQ6PCB5 846 aaPredicted RBP16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 PI4KBQ9UBF8 816 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 CEP131Q9UPN4 1083 aa16.69■□□□□ 0.26
SHCBP1-201ENST00000303383 KLRF2D3W0D1 207 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 SDF4Q9BRK5 362 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 DLEC1Q9Y238 1755 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 SNED1Q8TER0 1413 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 SCN9AQ15858 1988 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 DLGAP5Q15398 846 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 ZRSR1Q15695 479 aaKnown RBP16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 A0A1B0GVL5 298 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 PSMD14O00487 310 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 GABPAQ06546 454 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 PFKFB3Q16875 520 aaPredicted RBP16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 OXER1Q8TDS5 423 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 TRIM44Q96DX7 344 aaPredicted RBP16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 CLIP2Q9UDT6 1046 aa16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 SEC63Q9UGP8 760 aaKnown RBP16.68■□□□□ 0.26
SHCBP1-201ENST00000303383 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 A0A1W2PQ27 194 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 A0A1W2PQ64 194 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 A0A1W2PQD8 194 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 CTAGE5O15320 804 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 PPP4R3BQ5MIZ7 849 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 CCDC17Q96LX7 622 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 PHF20Q9BVI0 1012 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 MAD2L2Q9UI95 211 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 CALML3P27482 149 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 HEATR3Q7Z4Q2 680 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 IDI2Q9BXS1 227 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 TAOK3Q9H2K8 898 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 VAT1LQ9HCJ6 419 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 MTMR4Q9NYA4 1195 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 ZNRF3Q9ULT6 936 aa16.67■□□□□ 0.26
SHCBP1-201ENST00000303383 TTLL1O95922 423 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 USP17L2Q6R6M4 530 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 HOMER1Q86YM7 354 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 ZFPM1Q8IX07 1006 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 LRRC47Q8N1G4 583 aaKnown RBP16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 VPS33BQ9H267 617 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 BCS1LQ9Y276 419 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 ECM29Q5VYK3 1845 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 GOLPH3LQ9H4A5 285 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 PPP6R2O75170 966 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 CERKLQ49MI3 558 aaPredicted RBP16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 CCDC148Q8NFR7 591 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 GPKOWQ92917 476 aaPredicted RBP eCLIP16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 EHD4Q9H223 541 aa16.66■□□□□ 0.26
SHCBP1-201ENST00000303383 RRP36Q96EU6 259 aaKnown RBP16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 PRMT6Q96LA8 375 aaPredicted RBP16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 FAM198AQ9UFP1 575 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 ZBTB12Q9Y330 459 aaPredicted RBP16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 DDX60LQ5H9U9 1706 aaKnown RBP16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 TRIM75PA6NK02 468 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 FAM196BA6NMK8 535 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 SHMT1P34896 483 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 ADAMTSL1Q8N6G6 1762 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 DDTLA6NHG4 134 aaPredicted RBP16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 PLCB2Q00722 1185 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 CCDC173Q0VFZ6 552 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 VEZTQ9HBM0 779 aa16.65■□□□□ 0.26
SHCBP1-201ENST00000303383 CLRN2A0PK11 232 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 PALM3A6NDB9 673 aaPredicted RBP16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 CCDC96Q2M329 555 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 FOXP4Q8IVH2 680 aaPredicted RBP16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 KRI1Q8N9T8 703 aaKnown RBP16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 FOCADQ5VW36 1801 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 MYO1BO43795 1136 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 VIL1P09327 827 aaKnown RBP16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 TYRO3Q06418 890 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 CLEC10AQ8IUN9 316 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 CCDC12Q8WUD4 166 aaPredicted RBP16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 MYH8P13535 1937 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 FRMPD2Q68DX3 1309 aaPredicted RBP16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 PSDA5PKW4 1024 aaPredicted RBP16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 USP17L5A8MUK1 530 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 ENTPD3O75355 529 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 CMA1P23946 247 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 NDUFA8P51970 172 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 CSRNP1Q96S65 589 aa16.64■□□□□ 0.25
SHCBP1-201ENST00000303383 CUTAO60888 179 aa16.63■□□□□ 0.25
SHCBP1-201ENST00000303383 CPVLQ9H3G5 476 aa16.63■□□□□ 0.25
SHCBP1-201ENST00000303383 SH3GLB2Q9NR46 395 aa16.63■□□□□ 0.25
SHCBP1-201ENST00000303383 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
SHCBP1-201ENST00000303383 ZMYND15Q9H091 742 aa16.63■□□□□ 0.25
SHCBP1-201ENST00000303383 PCDHB6Q9Y5E3 794 aa16.63■□□□□ 0.25
SHCBP1-201ENST00000303383 PLIN4Q96Q06 1357 aa16.63■□□□□ 0.25
SHCBP1-201ENST00000303383 NPM3O75607 178 aaKnown RBP16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 SYKP43405 635 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 NAPAP54920 295 aa16.62■□□□□ 0.25
SHCBP1-201ENST00000303383 PTPAQ15257 358 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms