RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 VPS54Q9P1Q0 977 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 ADAMTSL1Q8N6G6 1762 aa12.21□□□□□ -0.46
CLP1-201ENST00000302731 FAM237AA0A1B0GTK4 181 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 CAVIN2O95810 425 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 CALML3P27482 149 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 POLD1P28340 1107 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 FMR1NBQ8N0W7 255 aaPredicted RBP12.2□□□□□ -0.46
CLP1-201ENST00000302731 SHISA4Q96DD7 197 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 GOLPH3LQ9H4A5 285 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 MTMR4Q9NYA4 1195 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 PIM2Q9P1W9 311 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 CEP131Q9UPN4 1083 aa12.2□□□□□ -0.46
CLP1-201ENST00000302731 ATRNL1Q5VV63 1379 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 CUTAO60888 179 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 ENTPD3O75355 529 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 BMP15O95972 392 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 VIL1P09327 827 aaKnown RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 SHMT1P34896 483 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 TOB1P50616 345 aaPredicted RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 NFIAQ12857 509 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 NPY5RQ15761 445 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 GALNT17Q6IS24 598 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 RSBN1LQ6PCB5 846 aaPredicted RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 FOXP4Q8IVH2 680 aaPredicted RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 PI4KBQ9UBF8 816 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 GREB1LQ9C091 1923 aaPredicted RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 MYH8P13535 1937 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 TTLL1O95922 423 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 PARP1P09874 1014 aaKnown RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 TRAPPC10P48553 1259 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 RBM5P52756 815 aaKnown RBP eCLIP12.19□□□□□ -0.46
CLP1-201ENST00000302731 NR5A1Q13285 461 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 CAMK4Q16566 473 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 METTL16Q86W50 562 aaKnown RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 STAG2Q8N3U4 1231 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 LARGE2Q8N3Y3 721 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 CCDC148Q8NFR7 591 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 TNFRSF25Q93038 417 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 TIGD1Q96MW7 591 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 GMLQ99445 158 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 FAM198AQ9UFP1 575 aa12.19□□□□□ -0.46
CLP1-201ENST00000302731 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
CLP1-201ENST00000302731 KLRF2D3W0D1 207 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 hCG_1984214I3L0E3 225 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 SNHG28P0DPA3 235 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 AKR1B1P15121 316 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 MMP14P50281 582 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 TYRO3Q06418 890 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 ASPRV1Q53RT3 343 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 ZNF713Q8N859 430 aaPredicted RBP12.18□□□□□ -0.46
CLP1-201ENST00000302731 KRI1Q8N9T8 703 aaKnown RBP12.18□□□□□ -0.46
CLP1-201ENST00000302731 ZNF579Q8NAF0 562 aaKnown RBP12.18□□□□□ -0.46
CLP1-201ENST00000302731 DAGLBQ8NCG7 672 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 OXER1Q8TDS5 423 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 PDLIM2Q96JY6 352 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 HDAC9Q9UKV0 1011 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 ZNRF3Q9ULT6 936 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 HPSEQ9Y251 543 aa12.18□□□□□ -0.46
CLP1-201ENST00000302731 CYTH3O43739 400 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 PTPREP23469 700 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 NDUFA8P51970 172 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 NLRP5P59047 1200 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 RESP18Q5W5W9 173 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 SASS6Q6UVJ0 657 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 ELOA2Q8IYF1 753 aaPredicted RBP12.17□□□□□ -0.46
CLP1-201ENST00000302731 RNF214Q8ND24 703 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 AGBL3Q8NEM8 1001 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 FAM200AQ8TCP9 573 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 CABP5Q9NP86 173 aa12.17□□□□□ -0.46
CLP1-201ENST00000302731 SIPA1L1O43166 1804 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 A0A1B0GVL5 298 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 hCG_1642624A0A1W2PR95 340 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 TRIM75PA6NK02 468 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 ZBTB7AO95365 584 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 PDHBP11177 359 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 MARCKSP29966 332 aaPredicted RBP12.16□□□□□ -0.46
CLP1-201ENST00000302731 DALRD3Q5D0E6 543 aaKnown RBP12.16□□□□□ -0.46
CLP1-201ENST00000302731 FKBP1CQ5VVH2 108 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 TATDN1Q6P1N9 297 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 NIM1KQ8IY84 436 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 CKAP2LQ8IYA6 745 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 MTMR14Q8NCE2 650 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 CCDC12Q8WUD4 166 aaPredicted RBP12.16□□□□□ -0.46
CLP1-201ENST00000302731 RIOX1Q9H6W3 641 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 ZNF277Q9NRM2 450 aaPredicted RBP12.16□□□□□ -0.46
CLP1-201ENST00000302731 BARHL2Q9NY43 387 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 PCDHA4Q9UN74 947 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 SRPRBQ9Y5M8 271 aaKnown RBP12.16□□□□□ -0.46
CLP1-201ENST00000302731 MRVI1Q9Y6F6 885 aa12.16□□□□□ -0.46
CLP1-201ENST00000302731 BRCA1P38398 1863 aaKnown RBP12.16□□□□□ -0.46
CLP1-201ENST00000302731 SPDYE2BA6NHP3 402 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 PSMD14O00487 310 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 ZNF202O95125 648 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 SPDYE6P0CI01 402 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 PFKFB1P16118 471 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 SLC35G1Q2M3R5 365 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 SHC4Q6S5L8 630 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 ZFPM1Q8IX07 1006 aa12.15□□□□□ -0.46
CLP1-201ENST00000302731 BLIDQ8IZY5 108 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms