RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 MAGEA1P43355 309 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 STX17P56962 302 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 NBPF14Q5TI25 921 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 CHPF2Q9P2E5 772 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 DISP3Q9P2K9 1392 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 CEP104O60308 925 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 OR8K1Q8NGG5 319 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 MEIS3Q99687 375 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 FGFR1OP2Q9NVK5 253 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 DENND2AQ9ULE3 1009 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 ZKSCAN8Q15776 578 aaPredicted RBP12.43□□□□□ -0.42
GCN1-201ENST00000300648 NFE2L3Q9Y4A8 694 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 CBX8Q9HC52 389 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 ACEP12821 1306 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 TRIM11Q96F44 468 aa12.43□□□□□ -0.42
GCN1-201ENST00000300648 C10orf76Q5T2E6 689 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 WHAMMQ8TF30 809 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 SCOCQ9UIL1 159 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 PHLPP2Q6ZVD8 1323 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 DMTNQ08495 405 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.42
GCN1-201ENST00000300648 NME9Q86XW9 330 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 CCDC197Q8NCU1 140 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 RSAD2Q8WXG1 361 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 POLR2DO15514 142 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 XRCC5P13010 732 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 GARSP41250 739 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 RBM6P78332 1123 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 PLCB4Q15147 1175 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 RETREG2Q8NC44 543 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 C19orf44Q9H6X5 657 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 HSPA6P17066 643 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 HELBQ8NG08 1087 aaPredicted RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 CARD10Q9BWT7 1032 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 FAM135BQ49AJ0 1406 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 COL17A1Q9UMD9 1497 aaPredicted RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 ATP7AQ04656 1500 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 KPNA2P52292 529 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 SRRM1Q8IYB3 904 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 CDKL2Q92772 493 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 LARP6Q9BRS8 491 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 EMILIN1Q9Y6C2 1016 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 SCINQ9Y6U3 715 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 ZNF710Q8N1W2 664 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 EXOC4Q96A65 974 aa12.42□□□□□ -0.42
GCN1-201ENST00000300648 YTHDC2Q9H6S0 1430 aaKnown RBP12.42□□□□□ -0.42
GCN1-201ENST00000300648 RASIP1Q5U651 963 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 ZBTB3Q9H5J0 574 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 ARHGEF10LQ9HCE6 1279 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 MCM9Q9NXL9 1143 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 TTI1O43156 1089 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 TMED8Q6PL24 325 aaPredicted RBP12.41□□□□□ -0.42
GCN1-201ENST00000300648 KIFC3Q9BVG8 833 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 STAT1P42224 750 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 HACE1Q8IYU2 909 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 GFM2Q969S9 779 aaKnown RBP12.41□□□□□ -0.42
GCN1-201ENST00000300648 ANGPTL2Q9UKU9 493 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 SMIM24O75264 130 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 GNGT1P63211 74 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 SEPT10Q9P0V9 454 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 CCNT1O60563 726 aaKnown RBP12.41□□□□□ -0.42
GCN1-201ENST00000300648 TTC38Q5R3I4 469 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 ATP10BO94823 1461 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 LDHBP07195 334 aaKnown RBP12.41□□□□□ -0.42
GCN1-201ENST00000300648 PHEXP78562 749 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 DNM3Q9UQ16 869 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 SART1O43290 800 aaKnown RBP12.41□□□□□ -0.42
GCN1-201ENST00000300648 ADALQ6DHV7 355 aa12.41□□□□□ -0.42
GCN1-201ENST00000300648 LMNB1P20700 586 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 EIF3BP55884 814 aaKnown RBP12.4□□□□□ -0.42
GCN1-201ENST00000300648 CCDC13Q8IYE1 715 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 MYL1P05976 194 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 LRGUKQ96M69 825 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 CUEDC2Q9H467 287 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.42
GCN1-201ENST00000300648 ARHGEF35A5YM69 484 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 IL2RBP14784 551 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 EPHB4P54760 987 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 BCAS4Q8TDM0 211 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 METTL14Q9HCE5 456 aaKnown RBP12.4□□□□□ -0.42
GCN1-201ENST00000300648 ADGRF5Q8IZF2 1346 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 FOXO3O43524 673 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 PRPF6O94906 941 aaKnown RBP12.4□□□□□ -0.42
GCN1-201ENST00000300648 PCP11498 1178 aaKnown RBP12.4□□□□□ -0.42
GCN1-201ENST00000300648 PSMD6Q15008 389 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 PALM2Q8IXS6 379 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 LRRC8CQ8TDW0 803 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 JRKLQ9Y4A0 524 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 SBNO1A3KN83 1393 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 A0A087WUV0 522 aaPredicted RBP12.4□□□□□ -0.42
GCN1-201ENST00000300648 KRIT1O00522 736 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 ZC4H2Q9NQZ6 224 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 AFG3L2Q9Y4W6 797 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 ETF1P62495 437 aaKnown RBP12.4□□□□□ -0.42
GCN1-201ENST00000300648 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
GCN1-201ENST00000300648 H7C1D1 291 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms