RNA–Protein interactions for RNA: ENST00000297316.4

SOX17-201, Transcript of SRY-box 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX17, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX17-201ENST00000297316 AKAP17AQ02040 695 aaKnown RBP24.64■■□□□ 1.53
SOX17-201ENST00000297316 GNL2Q13823 731 aaKnown RBP24.64■■□□□ 1.53
SOX17-201ENST00000297316 SHMT1P34896 483 aa24.63■■□□□ 1.53
SOX17-201ENST00000297316 SF3A1Q15459 793 aaKnown RBP24.63■■□□□ 1.53
SOX17-201ENST00000297316 ADALQ6DHV7 355 aa24.63■■□□□ 1.53
SOX17-201ENST00000297316 KCNG4Q8TDN1 519 aa24.63■■□□□ 1.53
SOX17-201ENST00000297316 VIL1P09327 827 aaKnown RBP24.63■■□□□ 1.53
SOX17-201ENST00000297316 OXER1Q8TDS5 423 aa24.63■■□□□ 1.53
SOX17-201ENST00000297316 DNAJC18Q9H819 358 aa24.63■■□□□ 1.53
SOX17-201ENST00000297316 MAD2L2Q9UI95 211 aa24.63■■□□□ 1.53
SOX17-201ENST00000297316 A0A1B0GVL5 298 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 PTGER2P43116 358 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 NT5C2P49902 561 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 EIF6P56537 245 aaKnown RBP24.62■■□□□ 1.53
SOX17-201ENST00000297316 FAM160A1Q05DH4 1040 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 UVSSAQ2YD98 709 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 CCDC73Q6ZRK6 1079 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 DIS3L2Q8IYB7 885 aaKnown RBP24.62■■□□□ 1.53
SOX17-201ENST00000297316 GMLQ99445 158 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 IDI2Q9BXS1 227 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 GOLGA8HP0CJ92 632 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 NR5A1Q13285 461 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 SLC35G1Q2M3R5 365 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 AXDND1Q5T1B0 1012 aaPredicted RBP24.62■■□□□ 1.53
SOX17-201ENST00000297316 NIM1KQ8IY84 436 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 MRPS27Q92552 414 aaKnown RBP24.62■■□□□ 1.53
SOX17-201ENST00000297316 MAP3K14Q99558 947 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 USP25Q9UHP3 1055 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 BCS1LQ9Y276 419 aa24.62■■□□□ 1.53
SOX17-201ENST00000297316 SRCAPQ6ZRS2 3230 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 MARCKSP29966 332 aaPredicted RBP24.61■■□□□ 1.53
SOX17-201ENST00000297316 GRM4Q14833 912 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 PTPAQ15257 358 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 SHROOM1Q2M3G4 852 aaPredicted RBP24.61■■□□□ 1.53
SOX17-201ENST00000297316 CCDC178Q5BJE1 867 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 ZSCAN29Q8IWY8 852 aaPredicted RBP24.61■■□□□ 1.53
SOX17-201ENST00000297316 CPVLQ9H3G5 476 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 ZNRF3Q9ULT6 936 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.61■■□□□ 1.53
SOX17-201ENST00000297316 A0A1W2PQ27 194 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 A0A1W2PQ64 194 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 A0A1W2PQD8 194 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 ESPNB1AK53 854 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 NFKBIEO00221 500 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 HLA-DOAP06340 250 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 NDUFA8P51970 172 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 SLC39A14Q15043 492 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 SOGA3Q5TF21 947 aa24.61■■□□□ 1.53
SOX17-201ENST00000297316 FMR1NBQ8N0W7 255 aaPredicted RBP24.61■■□□□ 1.53
SOX17-201ENST00000297316 TAOK3Q9H2K8 898 aa24.6■■□□□ 1.53
SOX17-201ENST00000297316 KIF5BP33176 963 aa24.6■■□□□ 1.53
SOX17-201ENST00000297316 NOSTRINQ8IVI9 506 aa24.6■■□□□ 1.53
SOX17-201ENST00000297316 CLRN2A0PK11 232 aa24.59■■□□□ 1.53
SOX17-201ENST00000297316 AP5Z1O43299 807 aa24.59■■□□□ 1.53
SOX17-201ENST00000297316 CXCL9Q07325 125 aa24.59■■□□□ 1.53
SOX17-201ENST00000297316 TOB1P50616 345 aaPredicted RBP24.58■■□□□ 1.53
SOX17-201ENST00000297316 ANO6Q4KMQ2 910 aa24.58■■□□□ 1.53
SOX17-201ENST00000297316 NLGN2Q8NFZ4 835 aa24.58■■□□□ 1.53
SOX17-201ENST00000297316 MTMR4Q9NYA4 1195 aa24.58■■□□□ 1.53
SOX17-201ENST00000297316 USP17L2Q6R6M4 530 aa24.58■■□□□ 1.53
SOX17-201ENST00000297316 LRRC47Q8N1G4 583 aaKnown RBP24.58■■□□□ 1.53
SOX17-201ENST00000297316 SWAP70Q9UH65 585 aa24.58■■□□□ 1.53
SOX17-201ENST00000297316 CYTH3O43739 400 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 SAFBQ15424 915 aaKnown RBP eCLIP24.57■■□□□ 1.52
SOX17-201ENST00000297316 ERCC4Q92889 916 aaPredicted RBP24.57■■□□□ 1.52
SOX17-201ENST00000297316 PLIN4Q96Q06 1357 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 MYO3BQ8WXR4 1341 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 IGKV6D-41A0A0C4DH26 115 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 SHTN1A0MZ66 631 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 FAM205CA6NFA0 338 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 SPDYE2BA6NHP3 402 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 MPHOSPH10O00566 681 aaKnown RBP24.57■■□□□ 1.52
SOX17-201ENST00000297316 KINO60870 393 aaKnown RBP24.57■■□□□ 1.52
SOX17-201ENST00000297316 SPDYE6P0CI01 402 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 TOP1P11387 765 aaKnown RBP24.57■■□□□ 1.52
SOX17-201ENST00000297316 NOVP48745 357 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 PHF20Q9BVI0 1012 aa24.57■■□□□ 1.52
SOX17-201ENST00000297316 A0A087WWV3 80 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 PALM3A6NDB9 673 aaPredicted RBP24.56■■□□□ 1.52
SOX17-201ENST00000297316 TCP10L2B9ZVM9 353 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 ADAMTS3O15072 1205 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 FAM200AQ8TCP9 573 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 FOXP1Q9H334 677 aaPredicted RBP24.56■■□□□ 1.52
SOX17-201ENST00000297316 CD2APQ9Y5K6 639 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 MYH4Q9Y623 1939 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 GREB1LQ9C091 1923 aaPredicted RBP24.56■■□□□ 1.52
SOX17-201ENST00000297316 SCG2P13521 617 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 RASSF7Q02833 373 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 EHD4Q9H223 541 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 VPS33BQ9H267 617 aa24.56■■□□□ 1.52
SOX17-201ENST00000297316 USP17L5A8MUK1 530 aa24.55■■□□□ 1.52
SOX17-201ENST00000297316 NPY5RQ15761 445 aa24.55■■□□□ 1.52
SOX17-201ENST00000297316 NOM1Q5C9Z4 860 aaKnown RBP24.55■■□□□ 1.52
SOX17-201ENST00000297316 EARS2Q5JPH6 523 aaKnown RBP24.55■■□□□ 1.52
SOX17-201ENST00000297316 SASS6Q6UVJ0 657 aa24.55■■□□□ 1.52
SOX17-201ENST00000297316 LUZP1Q86V48 1076 aa24.55■■□□□ 1.52
SOX17-201ENST00000297316 GPKOWQ92917 476 aaPredicted RBP eCLIP24.55■■□□□ 1.52
SOX17-201ENST00000297316 DHX36Q9H2U1 1008 aaKnown RBP24.55■■□□□ 1.52
SOX17-201ENST00000297316 PI4KBQ9UBF8 816 aa24.55■■□□□ 1.52
SOX17-201ENST00000297316 CLIP2Q9UDT6 1046 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms