RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 RFC4P35249 363 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 AKNAD1Q5T1N1 836 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 CADPS2Q86UW7 1296 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 RPUSD2Q8IZ73 545 aaKnown RBP12.19□□□□□ -0.46
PBRM1-201ENST00000296302 FBXO18Q8NFZ0 1043 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 FAN1Q9Y2M0 1017 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 CCDC169A6NNP5 214 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 ARL1P40616 181 aaPredicted RBP12.19□□□□□ -0.46
PBRM1-201ENST00000296302 SLC35F6Q8N357 371 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 SMC1BQ8NDV3 1235 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 SIRT1Q96EB6 747 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 FNBP1Q96RU3 617 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 EPHB4P54760 987 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 IRX4P78413 519 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 DYMQ7RTS9 669 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 CEP120Q8N960 986 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 TMEM87AQ8NBN3 555 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 VPS54Q9P1Q0 977 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 PPP6R2O75170 966 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 CTDSPL2Q05D32 466 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 SLC39A14Q15043 492 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 AP1ARQ63HQ0 302 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 MRRFQ96E11 262 aaKnown RBP12.19□□□□□ -0.46
PBRM1-201ENST00000296302 POLR3EQ9NVU0 708 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 BCAP29Q9UHQ4 241 aa12.19□□□□□ -0.46
PBRM1-201ENST00000296302 ADCY9O60503 1353 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 GMNNO75496 209 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 SH2D4BQ5SQS7 431 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 C11orf57Q6ZUT1 292 aaPredicted RBP12.18□□□□□ -0.46
PBRM1-201ENST00000296302 RPAINQ86UA6 219 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 RASEFQ8IZ41 740 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ANKRD42Q8N9B4 389 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 LPIN2Q92539 896 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 EXOC7Q9UPT5 735 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 JRKLQ9Y4A0 524 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ARHGEF10O15013 1369 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 SMTNP53814 917 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 BIRC3Q13489 604 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 MAP7Q14244 749 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 CALCRLQ16602 461 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 LRCH2Q5VUJ6 765 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 RCOR1Q9UKL0 485 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 PCDHA5Q9Y5H7 936 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ZNF532Q9HCE3 1301 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 COPB1P53618 953 aaKnown RBP12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ITIH3Q06033 890 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ZNF827Q17R98 1081 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 CERS3Q8IU89 383 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 EAF2Q96CJ1 260 aaPredicted RBP12.18□□□□□ -0.46
PBRM1-201ENST00000296302 FAM89AQ96GI7 184 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 GSDMAQ96QA5 445 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 LSM14BQ9BX40 385 aaKnown RBP12.18□□□□□ -0.46
PBRM1-201ENST00000296302 PARD6BQ9BYG5 372 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 NT5C3AQ9H0P0 336 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 DNM3Q9UQ16 869 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 NDUFB9Q9Y6M9 179 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 PLXNC1O60486 1568 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 BICRAQ9NZM4 1560 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 PDIA3P30101 505 aaKnown RBP12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ZAP70P43403 619 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ADCY7P51828 1080 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 MAP3K21Q5TCX8 1036 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 FBXO38Q6PIJ6 1188 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ARMC9Q7Z3E5 817 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 ZNF654Q8IZM8 581 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 CLIC4Q9Y696 253 aa12.18□□□□□ -0.46
PBRM1-201ENST00000296302 PNMA6AP0CW24 399 aaPredicted RBP12.17□□□□□ -0.46
PBRM1-201ENST00000296302 CASP14P31944 242 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 STAT1P42224 750 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 CEBPAP49715 358 aaPredicted RBP12.17□□□□□ -0.46
PBRM1-201ENST00000296302 EIF4A1P60842 406 aaKnown RBP12.17□□□□□ -0.46
PBRM1-201ENST00000296302 SCRN1Q12765 414 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 SLFNL1Q499Z3 407 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 MGARPQ8TDB4 240 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 GCP02774 474 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 CLTAP09496 248 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 IL2RBP14784 551 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 PPARDQ03181 441 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 DPCR1Q3MIW9 517 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 PRDM1O75626 825 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
PBRM1-201ENST00000296302 SEPT14Q6ZU15 432 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 CCDC197Q8NCU1 140 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 ZNF594Q96JF6 807 aaPredicted RBP12.17□□□□□ -0.46
PBRM1-201ENST00000296302 PSMD1Q99460 953 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 HAUS7Q99871 368 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 NUF2Q9BZD4 464 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 FAM114A2Q9NRY5 505 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 PDE8AO60658 829 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 TPTE2Q6XPS3 522 aa12.17□□□□□ -0.46
PBRM1-201ENST00000296302 F8W031 263 aaPredicted RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 TXNDC9O14530 226 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 HNRNPH2P55795 449 aaKnown RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 GUCY2DQ02846 1103 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 NCBP1Q09161 790 aaKnown RBP12.16□□□□□ -0.46
PBRM1-201ENST00000296302 NELFCDQ8IXH7 590 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 MYOCDQ8IZQ8 938 aa12.16□□□□□ -0.46
PBRM1-201ENST00000296302 IFT88Q13099 833 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms