RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 CDKAL1Q5VV42 579 aa19.14■□□□□ 0.65
CHRNE-201ENST00000293780 RSRC2Q7L4I2 434 aaKnown RBP19.14■□□□□ 0.65
CHRNE-201ENST00000293780 PPFIBP1Q86W92 1011 aa19.14■□□□□ 0.65
CHRNE-201ENST00000293780 TNFRSF25Q93038 417 aa19.14■□□□□ 0.65
CHRNE-201ENST00000293780 PANX2Q96RD6 677 aa19.14■□□□□ 0.65
CHRNE-201ENST00000293780 PPP2R5BQ15173 497 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 TTC38Q5R3I4 469 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 ZSWIM4Q9H7M6 989 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 ADGRG1Q9Y653 693 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 CICQ96RK0 1608 aaPredicted RBP19.13■□□□□ 0.65
CHRNE-201ENST00000293780 ZNF804BA4D1E1 1349 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 CCDC175P0C221 793 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 CASP14P31944 242 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 CTR9Q6PD62 1173 aa19.13■□□□□ 0.65
CHRNE-201ENST00000293780 SRBD1Q8N5C6 995 aaKnown RBP19.13■□□□□ 0.65
CHRNE-201ENST00000293780 COL22A1Q8NFW1 1626 aaPredicted RBP19.12■□□□□ 0.65
CHRNE-201ENST00000293780 ERICH4A6NGS2 130 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 TPM1P09493 284 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 FERMT2Q96AC1 680 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 CTNND2Q9UQB3 1225 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 USP17L12C9JPN9 530 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 USP17L21D6R901 530 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 CCT6AP40227 531 aaKnown RBP19.12■□□□□ 0.65
CHRNE-201ENST00000293780 CC2D1AQ6P1N0 951 aaPredicted RBP19.12■□□□□ 0.65
CHRNE-201ENST00000293780 TMTC3Q6ZXV5 915 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 GPR161Q8N6U8 529 aaKnown RBP19.12■□□□□ 0.65
CHRNE-201ENST00000293780 CCDC34Q96HJ3 373 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 GSDMAQ96QA5 445 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 PARD6BQ9BYG5 372 aa19.12■□□□□ 0.65
CHRNE-201ENST00000293780 XDHP47989 1333 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 TAF1P21675 1872 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 TBC1D8O95759 1140 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 IL17AQ16552 155 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 FAM47AQ5JRC9 791 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 IQCA1Q86XH1 822 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 MTRQ99707 1265 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 RBM28Q9NW13 759 aaKnown RBP19.11■□□□□ 0.65
CHRNE-201ENST00000293780 DUOX1Q9NRD9 1551 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 POLR3GO15318 223 aaPredicted RBP19.11■□□□□ 0.65
CHRNE-201ENST00000293780 FXR1P51114 621 aaKnown RBP eCLIP19.11■□□□□ 0.65
CHRNE-201ENST00000293780 ATP2C1P98194 919 aaPredicted RBP19.11■□□□□ 0.65
CHRNE-201ENST00000293780 PIK3AP1Q6ZUJ8 805 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 GNL3LQ9NVN8 582 aaKnown RBP19.11■□□□□ 0.65
CHRNE-201ENST00000293780 CACNA1SQ13698 1873 aa19.11■□□□□ 0.65
CHRNE-201ENST00000293780 CNTNAP5Q8WYK1 1306 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 LOC102724428A0A0B4J2F2 783 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 MFAP3LO75121 409 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 GYPCP04921 128 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 CDC25AP30304 524 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 SIK1P57059 783 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 E2F4Q16254 413 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 CT47A1Q5JQC4 288 aaPredicted RBP19.1■□□□□ 0.65
CHRNE-201ENST00000293780 BRIP1Q9BX63 1249 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 BRMS1Q9HCU9 246 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 RNF225M0QZC1 329 aaPredicted RBP19.1■□□□□ 0.65
CHRNE-201ENST00000293780 ABL1P00519 1130 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 ERFEQ4G0M1 354 aa19.1■□□□□ 0.65
CHRNE-201ENST00000293780 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
CHRNE-201ENST00000293780 CDC5LQ99459 802 aaKnown RBP19.1■□□□□ 0.65
CHRNE-201ENST00000293780 MYH14Q7Z406 1995 aaKnown RBP19.1■□□□□ 0.65
CHRNE-201ENST00000293780 FGRP09769 529 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 MCM7P33993 719 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 RRAGBQ5VZM2 374 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 CREBRFQ8IUR6 639 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 ANKRD18AQ8IVF6 992 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 ZCCHC17Q9NP64 241 aaKnown RBP19.09■□□□□ 0.65
CHRNE-201ENST00000293780 KLRK1P26718 216 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 ACRBPQ8NEB7 543 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 CTAGE1Q96RT6 745 aa19.09■□□□□ 0.65
CHRNE-201ENST00000293780 DOT1LQ8TEK3 1739 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 BMP15O95972 392 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 TFRCP02786 760 aaKnown RBP19.08■□□□□ 0.65
CHRNE-201ENST00000293780 CYP2D6P10635 497 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 NLRP5P59047 1200 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 KRT31Q15323 416 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 SLC4A8Q2Y0W8 1093 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 FILIP1LQ4L180 1135 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 RABGGTAQ92696 567 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 GOLGA1Q92805 767 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 NAA15Q9BXJ9 866 aaKnown RBP19.08■□□□□ 0.65
CHRNE-201ENST00000293780 VPS16Q9H269 839 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 PUF60Q9UHX1 559 aaKnown RBP19.08■□□□□ 0.65
CHRNE-201ENST00000293780 MINPP1Q9UNW1 487 aa19.08■□□□□ 0.65
CHRNE-201ENST00000293780 CALM1P0DP23 149 aa19.08■□□□□ 0.64
CHRNE-201ENST00000293780 CALM2P0DP24 149 aa19.08■□□□□ 0.64
CHRNE-201ENST00000293780 CALM3P0DP25 149 aa19.08■□□□□ 0.64
CHRNE-201ENST00000293780 ZNF569Q5MCW4 686 aa19.08■□□□□ 0.64
CHRNE-201ENST00000293780 PDXDC2PQ6P474 469 aa19.08■□□□□ 0.64
CHRNE-201ENST00000293780 RASGRP2Q7LDG7 609 aa19.08■□□□□ 0.64
CHRNE-201ENST00000293780 MAPK8IP1Q9UQF2 711 aa19.08■□□□□ 0.64
CHRNE-201ENST00000293780 DDAH1O94760 285 aa19.07■□□□□ 0.64
CHRNE-201ENST00000293780 UBE4AQ14139 1066 aa19.07■□□□□ 0.64
CHRNE-201ENST00000293780 CAVIN4Q5BKX8 364 aa19.07■□□□□ 0.64
CHRNE-201ENST00000293780 IQUBQ8NA54 791 aa19.07■□□□□ 0.64
CHRNE-201ENST00000293780 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.07■□□□□ 0.64
CHRNE-201ENST00000293780 CTCFLQ8NI51 663 aaPredicted RBP19.07■□□□□ 0.64
CHRNE-201ENST00000293780 CELF1Q92879 486 aaKnown RBP19.07■□□□□ 0.64
CHRNE-201ENST00000293780 NSUN4Q96CB9 384 aaKnown RBP19.07■□□□□ 0.64
CHRNE-201ENST00000293780 UBXN6Q9BZV1 441 aa19.07■□□□□ 0.64
CHRNE-201ENST00000293780 TAB2Q9NYJ8 693 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms