RNA–Protein interactions for RNA: ENST00000292729.12

USP41-201, Transcript of ubiquitin specific peptidase 41, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene USP41, Length 920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP41-201ENST00000292729 EHD4Q9H223 541 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
USP41-201ENST00000292729 CABP5Q9NP86 173 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 SMC4Q9NTJ3 1288 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 NRBP1Q9UHY1 535 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 SERPINB13Q9UIV8 391 aa12.76□□□□□ -0.37
USP41-201ENST00000292729 GNAI3P08754 354 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 RARBP10826 455 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 MRPS5P82675 430 aaKnown RBP12.75□□□□□ -0.37
USP41-201ENST00000292729 ABCB5Q2M3G0 1257 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 CERKLQ49MI3 558 aaPredicted RBP12.75□□□□□ -0.37
USP41-201ENST00000292729 FAM47AQ5JRC9 791 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 MB21D1Q8N884 522 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 IL27Q8NEV9 243 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 ADAMTS19Q8TE59 1207 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 TOX2Q96NM4 488 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 API5Q9BZZ5 524 aaKnown RBP12.75□□□□□ -0.37
USP41-201ENST00000292729 SPATC1LQ9H0A9 340 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 MROH8Q9H579 483 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 XPNPEP3Q9NQH7 507 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 TMEM39AQ9NV64 488 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 SAP30BPQ9UHR5 308 aaKnown RBP12.75□□□□□ -0.37
USP41-201ENST00000292729 RAPGEFL1Q9UHV5 662 aa12.75□□□□□ -0.37
USP41-201ENST00000292729 COBLO75128 1261 aa12.74□□□□□ -0.37
USP41-201ENST00000292729 ERCC3P19447 782 aa12.74□□□□□ -0.37
USP41-201ENST00000292729 MAP3K12Q12852 859 aa12.74□□□□□ -0.37
USP41-201ENST00000292729 ADGRA1Q86SQ6 560 aa12.74□□□□□ -0.37
USP41-201ENST00000292729 TTC6Q86TZ1 520 aa12.74□□□□□ -0.37
USP41-201ENST00000292729 MAML3Q96JK9 1138 aa12.74□□□□□ -0.37
USP41-201ENST00000292729 UHRF1Q96T88 793 aaPredicted RBP12.74□□□□□ -0.37
USP41-201ENST00000292729 MEIS3Q99687 375 aa12.74□□□□□ -0.37
USP41-201ENST00000292729 ARIH1Q9Y4X5 557 aaPredicted RBP12.74□□□□□ -0.37
USP41-201ENST00000292729 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.74□□□□□ -0.37
USP41-201ENST00000292729 ROBO3Q96MS0 1386 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 DCDC2CA8MYV0 355 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 PQBP1O60828 265 aaKnown RBP12.73□□□□□ -0.37
USP41-201ENST00000292729 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
USP41-201ENST00000292729 G3BP1Q13283 466 aaKnown RBP eCLIP12.73□□□□□ -0.37
USP41-201ENST00000292729 CCDC158Q5M9N0 1113 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 TTC39AQ5SRH9 613 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 PRAMEF19Q5SWL8 479 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 ANKRD33Q7Z3H0 272 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 SLC44A5Q8NCS7 719 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 ACER1Q8TDN7 264 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 PPM1EQ8WY54 764 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 TSEN34Q9BSV6 310 aaKnown RBP12.73□□□□□ -0.37
USP41-201ENST00000292729 C1QTNF1Q9BXJ1 281 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 PARP14Q460N5 1801 aa12.73□□□□□ -0.37
USP41-201ENST00000292729 MYH8P13535 1937 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 A0A1W2PQ45 241 aaPredicted RBP12.72□□□□□ -0.37
USP41-201ENST00000292729 A0A1W2PQY0 241 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 ANP32CO43423 234 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 TIMP1P01033 207 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 CYP2E1P05181 493 aaPredicted RBP12.72□□□□□ -0.37
USP41-201ENST00000292729 FCER1AP12319 257 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 USP5P45974 858 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 FAAP100Q0VG06 881 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 PPIGQ13427 754 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP41-201ENST00000292729 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 NUP133Q8WUM0 1156 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 ZNF512BQ96KM6 892 aaPredicted RBP12.72□□□□□ -0.37
USP41-201ENST00000292729 GPR108Q9NPR9 543 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 SNRKQ9NRH2 765 aa12.72□□□□□ -0.37
USP41-201ENST00000292729 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
USP41-201ENST00000292729 MROH7Q68CQ1 1323 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 TCF20Q9UGU0 1960 aaKnown RBP12.71□□□□□ -0.37
USP41-201ENST00000292729 CT47B1P0C2W7 299 aaPredicted RBP12.71□□□□□ -0.37
USP41-201ENST00000292729 AKR1A1P14550 325 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 DYNLL1P63167 89 aaKnown RBP12.71□□□□□ -0.37
USP41-201ENST00000292729 MFSD5Q6N075 450 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 TMED8Q6PL24 325 aaPredicted RBP12.71□□□□□ -0.37
USP41-201ENST00000292729 CCDC129Q6ZRS4 1044 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 NCAPG2Q86XI2 1143 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.71□□□□□ -0.37
USP41-201ENST00000292729 PBX4Q9BYU1 374 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 TANGO6Q9C0B7 1094 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 TSPYL2Q9H2G4 693 aaPredicted RBP12.71□□□□□ -0.37
USP41-201ENST00000292729 PRDM12Q9H4Q4 367 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 STARD7Q9NQZ5 370 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 DIS3Q9Y2L1 958 aaKnown RBP12.71□□□□□ -0.37
USP41-201ENST00000292729 GBF1Q92538 1859 aa12.71□□□□□ -0.37
USP41-201ENST00000292729 COL11A1P12107 1806 aaPredicted RBP12.71□□□□□ -0.38
USP41-201ENST00000292729 NAV1Q8NEY1 1877 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 MOXD2PA6NHM9 499 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 SLC25A27O95847 323 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 PGK1P00558 417 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 CYP7A1P22680 504 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 DSG3P32926 999 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 PLS1Q14651 629 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 RAB30Q15771 203 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 RASIP1Q5U651 963 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 TINF2Q9BSI4 451 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 BDP1A6H8Y1 2624 aa12.7□□□□□ -0.38
USP41-201ENST00000292729 GUCY1A2P33402 732 aa12.69□□□□□ -0.38
USP41-201ENST00000292729 SHMT1P34896 483 aa12.69□□□□□ -0.38
USP41-201ENST00000292729 ACLYP53396 1101 aa12.69□□□□□ -0.38
USP41-201ENST00000292729 PSRC1Q6PGN9 363 aaPredicted RBP12.69□□□□□ -0.38
USP41-201ENST00000292729 TMEM199Q8N511 208 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms