RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 EIF6P56537 245 aaKnown RBP19.27■□□□□ 0.67
HIF3A-203ENST00000291300 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.67
HIF3A-203ENST00000291300 PFKFB3Q16875 520 aaPredicted RBP19.27■□□□□ 0.67
HIF3A-203ENST00000291300 TYW1BQ6NUM6 668 aa19.27■□□□□ 0.67
HIF3A-203ENST00000291300 DNAJC18Q9H819 358 aa19.27■□□□□ 0.67
HIF3A-203ENST00000291300 ZNF287Q9HBT7 754 aa19.27■□□□□ 0.67
HIF3A-203ENST00000291300 FAM198AQ9UFP1 575 aa19.27■□□□□ 0.67
HIF3A-203ENST00000291300 ATF5Q9Y2D1 282 aaPredicted RBP19.27■□□□□ 0.67
HIF3A-203ENST00000291300 DDTLA6NHG4 134 aaPredicted RBP19.26■□□□□ 0.67
HIF3A-203ENST00000291300 FKBP1AP62942 108 aaKnown RBP19.26■□□□□ 0.67
HIF3A-203ENST00000291300 USP17L2Q6R6M4 530 aa19.26■□□□□ 0.67
HIF3A-203ENST00000291300 SH3BP5LQ7L8J4 393 aa19.26■□□□□ 0.67
HIF3A-203ENST00000291300 TNFRSF25Q93038 417 aa19.26■□□□□ 0.67
HIF3A-203ENST00000291300 RTN4Q9NQC3 1192 aaKnown RBP19.26■□□□□ 0.67
HIF3A-203ENST00000291300 PALM3A6NDB9 673 aaPredicted RBP19.25■□□□□ 0.67
HIF3A-203ENST00000291300 PFKFB1P16118 471 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 KIF5BP33176 963 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 NOVP48745 357 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 SPECC1Q5M775 1068 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 SERPINB13Q9UIV8 391 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 UTRNP46939 3433 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 AP5Z1O43299 807 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 PPP6R2O75170 966 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 KRT2P35908 639 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 CC2D2BQ6DHV5 1058 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 PDLIM2Q96JY6 352 aa19.25■□□□□ 0.67
HIF3A-203ENST00000291300 KIF13BQ9NQT8 1826 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 KINO60870 393 aaKnown RBP19.24■□□□□ 0.67
HIF3A-203ENST00000291300 RAD17O75943 681 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 CMA1P23946 247 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 NT5C2P49902 561 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 ANO6Q4KMQ2 910 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 CCDC93Q567U6 631 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 CCDC178Q5BJE1 867 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 TDRD3Q9H7E2 651 aaKnown RBP19.24■□□□□ 0.67
HIF3A-203ENST00000291300 IGKV6D-41A0A0C4DH26 115 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 USP17L5A8MUK1 530 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 LRRC47Q8N1G4 583 aaKnown RBP19.24■□□□□ 0.67
HIF3A-203ENST00000291300 SLC16A10Q8TF71 515 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.24■□□□□ 0.67
HIF3A-203ENST00000291300 MTMR4Q9NYA4 1195 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 USP25Q9UHP3 1055 aa19.24■□□□□ 0.67
HIF3A-203ENST00000291300 XBP1P17861 261 aa19.23■□□□□ 0.67
HIF3A-203ENST00000291300 SUPT20HQ8NEM7 779 aa19.23■□□□□ 0.67
HIF3A-203ENST00000291300 PRMT6Q96LA8 375 aaPredicted RBP19.23■□□□□ 0.67
HIF3A-203ENST00000291300 MRIQ9BWK5 157 aa19.23■□□□□ 0.67
HIF3A-203ENST00000291300 PLIN4Q96Q06 1357 aa19.23■□□□□ 0.67
HIF3A-203ENST00000291300 KLRF2D3W0D1 207 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 TOP1P11387 765 aaKnown RBP19.22■□□□□ 0.67
HIF3A-203ENST00000291300 CFAP100Q494V2 611 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 RILPL1Q5EBL4 403 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 FBXO2Q9UK22 296 aaPredicted RBP19.22■□□□□ 0.67
HIF3A-203ENST00000291300 PSME4Q14997 1843 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 ZNF202O95125 648 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 NLRP5P59047 1200 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 HDLBPQ00341 1268 aaKnown RBP19.22■□□□□ 0.67
HIF3A-203ENST00000291300 WWC2Q6AWC2 1192 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 LUZP1Q86V48 1076 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 RASGRP4Q8TDF6 673 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 DNAJC25Q9H1X3 360 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 SERPINA10Q9UK55 444 aa19.22■□□□□ 0.67
HIF3A-203ENST00000291300 ZBTB12Q9Y330 459 aaPredicted RBP19.22■□□□□ 0.67
HIF3A-203ENST00000291300 FRMPD2Q68DX3 1309 aaPredicted RBP19.21■□□□□ 0.67
HIF3A-203ENST00000291300 PSMD14O00487 310 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 ANP32BQ92688 251 aaKnown RBP19.21■□□□□ 0.67
HIF3A-203ENST00000291300 HPSEQ9Y251 543 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 GREB1LQ9C091 1923 aaPredicted RBP19.21■□□□□ 0.67
HIF3A-203ENST00000291300 RESP18Q5W5W9 173 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 C11orf57Q6ZUT1 292 aaPredicted RBP19.21■□□□□ 0.67
HIF3A-203ENST00000291300 RTKN2Q8IZC4 609 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 LARGE2Q8N3Y3 721 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 PSMD1Q99460 953 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 IDI2Q9BXS1 227 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 UBA5Q9GZZ9 404 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 CBX8Q9HC52 389 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 CLIP2Q9UDT6 1046 aa19.21■□□□□ 0.67
HIF3A-203ENST00000291300 PARP1P09874 1014 aaKnown RBP19.2■□□□□ 0.66
HIF3A-203ENST00000291300 SASS6Q6UVJ0 657 aa19.2■□□□□ 0.66
HIF3A-203ENST00000291300 PDHBP11177 359 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 UVSSAQ2YD98 709 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 PIK3AP1Q6ZUJ8 805 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 USP49Q70CQ1 688 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 KRI1Q8N9T8 703 aaKnown RBP19.19■□□□□ 0.66
HIF3A-203ENST00000291300 SDF4Q9BRK5 362 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 VAT1LQ9HCJ6 419 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 RRAGDQ9NQL2 400 aaPredicted RBP19.19■□□□□ 0.66
HIF3A-203ENST00000291300 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 MPHOSPH10O00566 681 aaKnown RBP19.19■□□□□ 0.66
HIF3A-203ENST00000291300 CUTAO60888 179 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 HLA-DOAP06340 250 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 PTPREP23469 700 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 GNAQP50148 359 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 ZNF174Q15697 407 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 HEATR3Q7Z4Q2 680 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 ZSCAN29Q8IWY8 852 aaPredicted RBP19.19■□□□□ 0.66
HIF3A-203ENST00000291300 KLHL34Q8N239 644 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 JMYQ8N9B5 988 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 FAM200AQ8TCP9 573 aa19.19■□□□□ 0.66
HIF3A-203ENST00000291300 STXBP3O00186 592 aa19.18■□□□□ 0.66
HIF3A-203ENST00000291300 RSBN1LQ6PCB5 846 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms