RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 CPVLQ9H3G5 476 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 BRMS1Q9HCU9 246 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 FAM13BQ9NYF5 915 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 SERTAD1Q9UHV2 236 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 MAD2L2Q9UI95 211 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 CEP131Q9UPN4 1083 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 PCDHA5Q9Y5H7 936 aa22.1■■□□□ 1.13
BRAF-201ENST00000288602 ARID5BQ14865 1188 aa22.09■■□□□ 1.13
BRAF-201ENST00000288602 PIK3AP1Q6ZUJ8 805 aa22.09■■□□□ 1.13
BRAF-201ENST00000288602 TMEM47Q9BQJ4 181 aa22.09■■□□□ 1.13
BRAF-201ENST00000288602 SLC35G1Q2M3R5 365 aa22.09■■□□□ 1.13
BRAF-201ENST00000288602 KIAA1524Q8TCG1 905 aa22.09■■□□□ 1.13
BRAF-201ENST00000288602 EPSTI1Q96J88 318 aa22.09■■□□□ 1.13
BRAF-201ENST00000288602 PRR29P0C7W0 189 aa22.08■■□□□ 1.13
BRAF-201ENST00000288602 CERS5Q8N5B7 392 aa22.08■■□□□ 1.13
BRAF-201ENST00000288602 TBC1D22AQ8WUA7 517 aa22.08■■□□□ 1.13
BRAF-201ENST00000288602 EYA3Q99504 573 aa22.08■■□□□ 1.13
BRAF-201ENST00000288602 DAGLAQ9Y4D2 1042 aa22.08■■□□□ 1.13
BRAF-201ENST00000288602 TPM3P06753 285 aa22.08■■□□□ 1.13
BRAF-201ENST00000288602 NCAPHQ15003 741 aa22.08■■□□□ 1.13
BRAF-201ENST00000288602 ZC3H12CQ9C0D7 883 aaKnown RBP22.08■■□□□ 1.13
BRAF-201ENST00000288602 LTBP1Q14766 1721 aa22.08■■□□□ 1.12
BRAF-201ENST00000288602 MDM2Q00987 491 aaPredicted RBP22.07■■□□□ 1.12
BRAF-201ENST00000288602 RASGRP4Q8TDF6 673 aa22.07■■□□□ 1.12
BRAF-201ENST00000288602 MRFAP1L1Q96HT8 127 aa22.07■■□□□ 1.12
BRAF-201ENST00000288602 CYTH3O43739 400 aa22.07■■□□□ 1.12
BRAF-201ENST00000288602 SCNN1DP51172 638 aa22.07■■□□□ 1.12
BRAF-201ENST00000288602 TYW1BQ6NUM6 668 aa22.07■■□□□ 1.12
BRAF-201ENST00000288602 C16orf86Q6ZW13 317 aa22.07■■□□□ 1.12
BRAF-201ENST00000288602 CACTINQ8WUQ7 758 aaKnown RBP22.07■■□□□ 1.12
BRAF-201ENST00000288602 BPIFA3Q9BQP9 254 aa22.07■■□□□ 1.12
BRAF-201ENST00000288602 GAKO14976 1311 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 A0A087X0B3 334 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 PLSCR1O15162 318 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 IGSF3O75054 1194 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 BMP6P22004 513 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 LMOD1P29536 600 aaPredicted RBP22.06■■□□□ 1.12
BRAF-201ENST00000288602 GRM4Q14833 912 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 TTC38Q5R3I4 469 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 DPP8Q6V1X1 898 aaPredicted RBP22.06■■□□□ 1.12
BRAF-201ENST00000288602 FILIP1Q7Z7B0 1213 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 ANKS1AQ92625 1134 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 DDX60LQ5H9U9 1706 aaKnown RBP22.06■■□□□ 1.12
BRAF-201ENST00000288602 FAM205AQ6ZU69 1335 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 NPR1P16066 1061 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 CDC25BP30305 580 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 ZNF622Q969S3 477 aaKnown RBP eCLIP22.06■■□□□ 1.128e-8■■□□□ 11.6
BRAF-201ENST00000288602 FAM163AQ96GL9 167 aaPredicted RBP22.06■■□□□ 1.12
BRAF-201ENST00000288602 TCP11L1Q9NUJ3 509 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 LRRC37AA6NMS7 1700 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 SNED1Q8TER0 1413 aa22.06■■□□□ 1.12
BRAF-201ENST00000288602 PLCG2P16885 1265 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 PTGDRQ13258 359 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 POSTNQ15063 836 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 ZNF579Q8NAF0 562 aaKnown RBP22.05■■□□□ 1.12
BRAF-201ENST00000288602 COA1Q9GZY4 146 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 KCNQ5Q9NR82 932 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 ZNF219Q9P2Y4 722 aaPredicted RBP22.05■■□□□ 1.12
BRAF-201ENST00000288602 PARP3Q9Y6F1 533 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 MYH1P12882 1939 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 SLF2Q8IX21 1173 aa22.05■■□□□ 1.12
BRAF-201ENST00000288602 TTF2Q9UNY4 1162 aaKnown RBP22.05■■□□□ 1.12
BRAF-201ENST00000288602 VWA3AA6NCI4 1184 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 SMC2O95347 1197 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 ATP1A3P13637 1013 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 MCM7P33993 719 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 DHX58Q96C10 678 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 IFNKQ9P0W0 207 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 TMC4Q7Z404 712 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 SYMPKQ92797 1274 aaKnown RBP22.04■■□□□ 1.12
BRAF-201ENST00000288602 CEP95Q96GE4 821 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 XPO4Q9C0E2 1151 aaKnown RBP22.04■■□□□ 1.12
BRAF-201ENST00000288602 HSD3B7Q9H2F3 369 aa22.04■■□□□ 1.12
BRAF-201ENST00000288602 DDX4Q9NQI0 724 aaKnown RBP22.04■■□□□ 1.12
BRAF-201ENST00000288602 ACTN4O43707 911 aaKnown RBP22.03■■□□□ 1.12
BRAF-201ENST00000288602 USP17L2Q6R6M4 530 aa22.03■■□□□ 1.12
BRAF-201ENST00000288602 ZNF287Q9HBT7 754 aa22.03■■□□□ 1.12
BRAF-201ENST00000288602 CASP1P29466 404 aa22.03■■□□□ 1.12
BRAF-201ENST00000288602 HEATR3Q7Z4Q2 680 aa22.03■■□□□ 1.12
BRAF-201ENST00000288602 CERS3Q8IU89 383 aa22.03■■□□□ 1.12
BRAF-201ENST00000288602 DBNDD1Q9H9R9 158 aa22.03■■□□□ 1.12
BRAF-201ENST00000288602 SPTLC3Q9NUV7 552 aa22.03■■□□□ 1.12
BRAF-201ENST00000288602 G3V3G9 751 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 PDE6BP35913 854 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 HSP90AA4PQ58FG1 418 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 DCAF8Q5TAQ9 597 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 WWC2Q6AWC2 1192 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 BLIDQ8IZY5 108 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 MAN1B1Q9UKM7 699 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 KLRF2D3W0D1 207 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 SLURP2P0DP57 97 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 ALDH1B1P30837 517 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 AFMP43652 599 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 CCDC178Q5BJE1 867 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 CLEC10AQ8IUN9 316 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 NEDD1Q8NHV4 660 aa22.02■■□□□ 1.12
BRAF-201ENST00000288602 PALM3A6NDB9 673 aaPredicted RBP22.01■■□□□ 1.11
BRAF-201ENST00000288602 SMTNL1A8MU46 457 aa22.01■■□□□ 1.11
BRAF-201ENST00000288602 EIF6P56537 245 aaKnown RBP22.01■■□□□ 1.11
BRAF-201ENST00000288602 COL11A2P13942 1736 aaPredicted RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms