RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 INCENPQ9NQS7 918 aa29.84■■■□□ 2.37
PDF-201ENST00000288022 TOMM22Q9NS69 142 aa29.84■■■□□ 2.37
PDF-201ENST00000288022 HAND2P61296 217 aa29.83■■■□□ 2.37
PDF-201ENST00000288022 GTF3C2Q8WUA4 911 aaPredicted RBP29.83■■■□□ 2.37
PDF-201ENST00000288022 GOPCQ9HD26 462 aa29.83■■■□□ 2.37
PDF-201ENST00000288022 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.83■■■□□ 2.37
PDF-201ENST00000288022 TSPY2A6NKD2 308 aa29.82■■■□□ 2.36
PDF-201ENST00000288022 CHMLP26374 656 aa29.82■■■□□ 2.36
PDF-201ENST00000288022 HOXD10P28358 340 aa29.82■■■□□ 2.36
PDF-201ENST00000288022 KIAA1755Q5JYT7 1200 aa29.82■■■□□ 2.36
PDF-201ENST00000288022 NEDD1Q8NHV4 660 aa29.82■■■□□ 2.36
PDF-201ENST00000288022 PAGR1Q9BTK6 254 aa29.82■■■□□ 2.36
PDF-201ENST00000288022 NYAP2Q9P242 653 aa29.82■■■□□ 2.36
PDF-201ENST00000288022 MGAMO43451 1857 aa29.81■■■□□ 2.36
PDF-201ENST00000288022 RAD50Q92878 1312 aa29.81■■■□□ 2.36
PDF-201ENST00000288022 IGKV6D-41A0A0C4DH26 115 aa29.81■■■□□ 2.36
PDF-201ENST00000288022 CEP95Q96GE4 821 aa29.81■■■□□ 2.36
PDF-201ENST00000288022 CLIP2Q9UDT6 1046 aa29.81■■■□□ 2.36
PDF-201ENST00000288022 PLIN4Q96Q06 1357 aa29.8■■■□□ 2.36
PDF-201ENST00000288022 TNPO2O14787 897 aaKnown RBP29.8■■■□□ 2.36
PDF-201ENST00000288022 RANBP6O60518 1105 aaKnown RBP29.8■■■□□ 2.36
PDF-201ENST00000288022 RRP12Q5JTH9 1297 aaKnown RBP29.8■■■□□ 2.36
PDF-201ENST00000288022 DSCC1Q9BVC3 393 aa29.8■■■□□ 2.36
PDF-201ENST00000288022 IL25Q9H293 177 aa29.8■■■□□ 2.36
PDF-201ENST00000288022 MORF4L1Q9UBU8 362 aa29.8■■■□□ 2.36
PDF-201ENST00000288022 SRRDQ9UH36 339 aa29.8■■■□□ 2.36
PDF-201ENST00000288022 PTCH2Q9Y6C5 1203 aa29.8■■■□□ 2.36
PDF-201ENST00000288022 ZNF213O14771 459 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 PEX10O60683 326 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 PRMT2P55345 433 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 GPRC5AQ8NFJ5 357 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 TXNRD2Q9NNW7 524 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 MTMR4Q9NYA4 1195 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 RBPJLQ9UBG7 517 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 TACC3Q9Y6A5 838 aa29.79■■■□□ 2.36
PDF-201ENST00000288022 MYPNQ86TC9 1320 aa29.78■■■□□ 2.36
PDF-201ENST00000288022 WDR46O15213 610 aaKnown RBP29.78■■■□□ 2.36
PDF-201ENST00000288022 ORC4O43929 436 aa29.78■■■□□ 2.36
PDF-201ENST00000288022 TTLL1O95922 423 aa29.78■■■□□ 2.36
PDF-201ENST00000288022 COG2Q14746 738 aa29.77■■■□□ 2.36
PDF-201ENST00000288022 SAMD1Q6SPF0 538 aaPredicted RBP29.77■■■□□ 2.36
PDF-201ENST00000288022 MFSD6Q6ZSS7 791 aa29.77■■■□□ 2.36
PDF-201ENST00000288022 CTNNA3Q9UI47 895 aa29.77■■■□□ 2.36
PDF-201ENST00000288022 MYH4Q9Y623 1939 aa29.77■■■□□ 2.36
PDF-201ENST00000288022 SPDYE16A6NNV3 312 aaPredicted RBP29.76■■■□□ 2.35
PDF-201ENST00000288022 FLOT1O75955 427 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 FGRP09769 529 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 ERVK-9P63128 1117 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 ERVK-24P63145 666 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 AKNAD1Q5T1N1 836 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 CCAR1Q8IX12 1150 aaKnown RBP29.76■■■□□ 2.35
PDF-201ENST00000288022 RAET1EQ8TD07 263 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 COA7Q96BR5 231 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 NBPF3Q9H094 633 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 HOXC10Q9NYD6 342 aa29.76■■■□□ 2.35
PDF-201ENST00000288022 PRKCZQ05513 592 aa29.75■■■□□ 2.35
PDF-201ENST00000288022 SLC9C1Q4G0N8 1177 aa29.75■■■□□ 2.35
PDF-201ENST00000288022 PPP4R3BQ5MIZ7 849 aa29.75■■■□□ 2.35
PDF-201ENST00000288022 TBC1D10CQ8IV04 446 aa29.75■■■□□ 2.35
PDF-201ENST00000288022 LRRC47Q8N1G4 583 aaKnown RBP29.75■■■□□ 2.35
PDF-201ENST00000288022 STAG1Q8WVM7 1258 aa29.75■■■□□ 2.35
PDF-201ENST00000288022 RNF41Q9H4P4 317 aaPredicted RBP29.75■■■□□ 2.35
PDF-201ENST00000288022 RABGAP1Q9Y3P9 1069 aa29.75■■■□□ 2.35
PDF-201ENST00000288022 LAMA4Q16363 1823 aa29.75■■■□□ 2.35
PDF-201ENST00000288022 F5H6K3 240 aa29.74■■■□□ 2.35
PDF-201ENST00000288022 KLRC3Q07444 240 aa29.74■■■□□ 2.35
PDF-201ENST00000288022 IMMTQ16891 758 aaKnown RBP29.74■■■□□ 2.35
PDF-201ENST00000288022 FAM83BQ5T0W9 1011 aa29.74■■■□□ 2.35
PDF-201ENST00000288022 POTEEQ6S8J3 1075 aa29.74■■■□□ 2.35
PDF-201ENST00000288022 STX8Q9UNK0 236 aa29.74■■■□□ 2.35
PDF-201ENST00000288022 NMT2O60551 498 aa29.73■■■□□ 2.35
PDF-201ENST00000288022 PCP11498 1178 aaKnown RBP29.73■■■□□ 2.35
PDF-201ENST00000288022 Q3C1V9 767 aa29.73■■■□□ 2.35
PDF-201ENST00000288022 BMP2KLQ5H9B9 411 aa29.73■■■□□ 2.35
PDF-201ENST00000288022 LBX2Q6XYB7 198 aa29.73■■■□□ 2.35
PDF-201ENST00000288022 MKL1Q969V6 931 aa29.73■■■□□ 2.35
PDF-201ENST00000288022 CWC22Q9HCG8 908 aaKnown RBP29.73■■■□□ 2.35
PDF-201ENST00000288022 GABRQQ9UN88 632 aa29.73■■■□□ 2.35
PDF-201ENST00000288022 SGSM2O43147 1006 aa29.72■■■□□ 2.35
PDF-201ENST00000288022 NDUFB10O96000 172 aa29.72■■■□□ 2.35
PDF-201ENST00000288022 NUP88Q99567 741 aaPredicted RBP29.72■■■□□ 2.35
PDF-201ENST00000288022 IL17RBQ9NRM6 502 aa29.72■■■□□ 2.35
PDF-201ENST00000288022 SYNPO2Q9UMS6 1093 aa29.72■■■□□ 2.35
PDF-201ENST00000288022 CNMDO75829 334 aa29.71■■■□□ 2.35
PDF-201ENST00000288022 DSG3P32926 999 aa29.71■■■□□ 2.35
PDF-201ENST00000288022 FLT3LGP49771 235 aa29.71■■■□□ 2.35
PDF-201ENST00000288022 CCNA1P78396 465 aa29.71■■■□□ 2.35
PDF-201ENST00000288022 NBPF11Q86T75 865 aa29.71■■■□□ 2.35
PDF-201ENST00000288022 PPP4R2Q9NY27 417 aa29.71■■■□□ 2.35
PDF-201ENST00000288022 BTBD7Q9P203 1132 aa29.71■■■□□ 2.35
PDF-201ENST00000288022 MAPK4P31152 587 aa29.7■■■□□ 2.35
PDF-201ENST00000288022 ERICH6BQ5W0A0 696 aa29.7■■■□□ 2.35
PDF-201ENST00000288022 ATG4CQ96DT6 458 aa29.7■■■□□ 2.35
PDF-201ENST00000288022 NEDD4P46934 1319 aa29.7■■■□□ 2.34
PDF-201ENST00000288022 PTH1RQ03431 593 aa29.69■■■□□ 2.34
PDF-201ENST00000288022 WDR78Q5VTH9 848 aa29.69■■■□□ 2.34
PDF-201ENST00000288022 GMCL1P1Q8NEA9 526 aa29.69■■■□□ 2.34
PDF-201ENST00000288022 SH3TC2Q8TF17 1288 aa29.69■■■□□ 2.34
PDF-201ENST00000288022 ESR2Q92731 530 aa29.69■■■□□ 2.34
PDF-201ENST00000288022 PORCNQ9H237 461 aa29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms