RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 NOVP48745 357 aa23.49■■□□□ 1.35
TIMP4-201ENST00000287814 CAP1Q01518 475 aa23.49■■□□□ 1.35
TIMP4-201ENST00000287814 PABPC4Q13310 644 aaKnown RBP eCLIP23.49■■□□□ 1.35
TIMP4-201ENST00000287814 RPAP3Q9H6T3 665 aaPredicted RBP23.49■■□□□ 1.35
TIMP4-201ENST00000287814 KDM4AO75164 1064 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 OSBPP22059 807 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 NECTIN1Q15223 517 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 COL13A1Q5TAT6 717 aaPredicted RBP23.48■■□□□ 1.35
TIMP4-201ENST00000287814 POTEEQ6S8J3 1075 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 CATSPERGQ6ZRH7 1159 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 STOX1Q6ZVD7 989 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 LRRC47Q8N1G4 583 aaKnown RBP23.48■■□□□ 1.35
TIMP4-201ENST00000287814 ESR2Q92731 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L15C9J2P7 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L13C9JLJ4 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L11C9JVI0 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L18D6R9N7 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L22D6RA61 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L17D6RBQ6 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L19D6RCP7 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L20D6RJB6 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 FKTNO75072 461 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 USP17L24Q0WX57 530 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 TCP11L1Q9NUJ3 509 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 ZSWIM5Q9P217 1185 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 PNMA3Q9UL41 463 aa23.48■■□□□ 1.35
TIMP4-201ENST00000287814 F5H6K3 240 aa23.47■■□□□ 1.35
TIMP4-201ENST00000287814 BCRP11274 1271 aa23.47■■□□□ 1.35
TIMP4-201ENST00000287814 IRX3P78415 501 aaPredicted RBP23.47■■□□□ 1.35
TIMP4-201ENST00000287814 SP3Q02447 781 aa23.47■■□□□ 1.35
TIMP4-201ENST00000287814 KLRC3Q07444 240 aa23.47■■□□□ 1.35
TIMP4-201ENST00000287814 SMCR8Q8TEV9 937 aaPredicted RBP23.47■■□□□ 1.35
TIMP4-201ENST00000287814 LPAR1Q92633 364 aa23.47■■□□□ 1.35
TIMP4-201ENST00000287814 ZKSCAN3Q9BRR0 538 aa23.47■■□□□ 1.35
TIMP4-201ENST00000287814 STX8Q9UNK0 236 aa23.47■■□□□ 1.35
TIMP4-201ENST00000287814 E7EWF7 191 aa23.46■■□□□ 1.35
TIMP4-201ENST00000287814 SLC27A2O14975 620 aa23.46■■□□□ 1.35
TIMP4-201ENST00000287814 RAD21O60216 631 aa23.46■■□□□ 1.35
TIMP4-201ENST00000287814 PEX10O60683 326 aa23.46■■□□□ 1.35
TIMP4-201ENST00000287814 NDUFB10O96000 172 aa23.45■■□□□ 1.34
TIMP4-201ENST00000287814 CREB3L3Q68CJ9 461 aa23.45■■□□□ 1.34
TIMP4-201ENST00000287814 RCSD1Q6JBY9 416 aa23.45■■□□□ 1.34
TIMP4-201ENST00000287814 NUP88Q99567 741 aaPredicted RBP23.45■■□□□ 1.34
TIMP4-201ENST00000287814 GOPCQ9HD26 462 aa23.45■■□□□ 1.34
TIMP4-201ENST00000287814 HERVK_113P62684 666 aa23.44■■□□□ 1.34
TIMP4-201ENST00000287814 ANKRD13CQ8N6S4 541 aa23.44■■□□□ 1.34
TIMP4-201ENST00000287814 CD99L2Q8TCZ2 262 aa23.44■■□□□ 1.34
TIMP4-201ENST00000287814 KRT23Q9C075 422 aa23.44■■□□□ 1.34
TIMP4-201ENST00000287814 CNNM2Q9H8M5 875 aa23.44■■□□□ 1.34
TIMP4-201ENST00000287814 COL9A3Q14050 684 aaPredicted RBP23.44■■□□□ 1.34
TIMP4-201ENST00000287814 CYB5R4Q7L1T6 521 aa23.44■■□□□ 1.34
TIMP4-201ENST00000287814 WDR46O15213 610 aaKnown RBP23.43■■□□□ 1.34
TIMP4-201ENST00000287814 ECM2O94769 699 aaPredicted RBP23.43■■□□□ 1.34
TIMP4-201ENST00000287814 CTGFP29279 349 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 FAM83BQ5T0W9 1011 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 GMCL1P1Q8NEA9 526 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 CHMP4CQ96CF2 233 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 TMEM47Q9BQJ4 181 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 TANGO6Q9C0B7 1094 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 ARHGAP39Q9C0H5 1083 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 TXNRD2Q9NNW7 524 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 RBPJLQ9UBG7 517 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 SYNPO2Q9UMS6 1093 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 GTF3C3Q9Y5Q9 886 aa23.43■■□□□ 1.34
TIMP4-201ENST00000287814 RASGRP2Q7LDG7 609 aa23.42■■□□□ 1.34
TIMP4-201ENST00000287814 FBXO28Q9NVF7 368 aa23.42■■□□□ 1.34
TIMP4-201ENST00000287814 MYH4Q9Y623 1939 aa23.42■■□□□ 1.34
TIMP4-201ENST00000287814 SPDYE16A6NNV3 312 aaPredicted RBP23.41■■□□□ 1.34
TIMP4-201ENST00000287814 GCLCP48506 637 aaPredicted RBP23.41■■□□□ 1.34
TIMP4-201ENST00000287814 NT5C2P49902 561 aa23.41■■□□□ 1.34
TIMP4-201ENST00000287814 LACTBP83111 547 aaPredicted RBP23.41■■□□□ 1.34
TIMP4-201ENST00000287814 PPP4R3BQ5MIZ7 849 aa23.41■■□□□ 1.34
TIMP4-201ENST00000287814 SLFN13Q68D06 897 aa23.41■■□□□ 1.34
TIMP4-201ENST00000287814 TRDNQ13061 729 aa23.41■■□□□ 1.34
TIMP4-201ENST00000287814 COG2Q14746 738 aa23.41■■□□□ 1.34
TIMP4-201ENST00000287814 RASEFQ8IZ41 740 aa23.41■■□□□ 1.34
TIMP4-201ENST00000287814 TTC14Q96N46 770 aa23.41■■□□□ 1.34
TIMP4-201ENST00000287814 ZSCAN10Q96SZ4 725 aaPredicted RBP23.41■■□□□ 1.34
TIMP4-201ENST00000287814 FLOT1O75955 427 aa23.4■■□□□ 1.34
TIMP4-201ENST00000287814 TOP1P11387 765 aaKnown RBP23.4■■□□□ 1.34
TIMP4-201ENST00000287814 Q3C1V9 767 aa23.4■■□□□ 1.34
TIMP4-201ENST00000287814 IQCA1Q86XH1 822 aa23.4■■□□□ 1.34
TIMP4-201ENST00000287814 NCOA7Q8NI08 942 aa23.4■■□□□ 1.34
TIMP4-201ENST00000287814 ERO1AQ96HE7 468 aa23.4■■□□□ 1.34
TIMP4-201ENST00000287814 CNMDO75829 334 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 MCCP23508 829 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 DSG3P32926 999 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 FAM110CQ1W6H9 321 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 CHST3Q7LGC8 479 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 DGKHQ86XP1 1220 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 MB21D2Q8IYB1 491 aaPredicted RBP23.39■■□□□ 1.34
TIMP4-201ENST00000287814 ENAHQ8N8S7 591 aaPredicted RBP23.39■■□□□ 1.34
TIMP4-201ENST00000287814 MORF4L1Q9UBU8 362 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 MTMR7Q9Y216 660 aa23.39■■□□□ 1.34
TIMP4-201ENST00000287814 TNKSO95271 1327 aa23.39■■□□□ 1.33
TIMP4-201ENST00000287814 ANTXR2P58335 489 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 LBX2Q6XYB7 198 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 ANKS1AQ92625 1134 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 PAGR1Q9BTK6 254 aa23.38■■□□□ 1.33
TIMP4-201ENST00000287814 HOXC10Q9NYD6 342 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms