RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 SPP2Q13103 211 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 PPP4R3BQ5MIZ7 849 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 MICU3Q86XE3 530 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 WDR18Q9BV38 432 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 NAP1L2Q9ULW6 460 aaPredicted RBP25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 AFG3L2Q9Y4W6 797 aa25.52■■□□□ 1.68
PDLIM3-203ENST00000284771 K7ELQ4 463 aaPredicted RBP25.51■■□□□ 1.67
PDLIM3-203ENST00000284771 CATIPQ7Z7H3 387 aa25.51■■□□□ 1.67
PDLIM3-203ENST00000284771 CCDC144CPQ8IYA2 1237 aa25.51■■□□□ 1.67
PDLIM3-203ENST00000284771 NECAB1Q8N987 351 aa25.51■■□□□ 1.67
PDLIM3-203ENST00000284771 ARHGEF10LQ9HCE6 1279 aa25.51■■□□□ 1.67
PDLIM3-203ENST00000284771 FAM217BQ9NTX9 383 aaPredicted RBP25.51■■□□□ 1.67
PDLIM3-203ENST00000284771 MTMR7Q9Y216 660 aa25.51■■□□□ 1.67
PDLIM3-203ENST00000284771 UNCXA6NJT0 531 aa25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 GOLGA8BA8MQT2 603 aa25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 ZBTB43O43298 467 aa25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 CCT2P78371 535 aaKnown RBP25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 FSTL1Q12841 308 aa25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 DGKZQ13574 1117 aa25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 ZNF280CQ8ND82 737 aa25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 NUP133Q8WUM0 1156 aa25.5■■□□□ 1.67
PDLIM3-203ENST00000284771 SPDYE5A6NIY4 337 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 F5H6K3 240 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 PFKFB2O60825 505 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 CDC27P30260 824 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 ANP32AP39687 249 aaKnown RBP25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 KLRC3Q07444 240 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 SCRN1Q12765 414 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 SAPCD2Q86UD0 394 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 ERO1BQ86YB8 467 aa25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 NCOA5Q9HCD5 579 aaKnown RBP25.49■■□□□ 1.67
PDLIM3-203ENST00000284771 TRIM75PA6NK02 468 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 SNHG28P0DPA3 235 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 PDHBP11177 359 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 ZYXQ15942 572 aaKnown RBP25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 HSCBQ8IWL3 235 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 FANCBQ8NB91 859 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 ZSCAN31Q96LW9 406 aaPredicted RBP25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 USP17L10C9JJH3 530 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 IRF6O14896 467 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 DTNBO60941 627 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 DDAH1O94760 285 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 GJA5P36382 358 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 BACE1P56817 501 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 PPATQ06203 517 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 MTMR2Q13614 643 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 GMCL1P1Q8NEA9 526 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 OPTNQ96CV9 577 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 SLC10A4Q96EP9 437 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 OTUD5Q96G74 571 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 KIAA1683Q9H0B3 1180 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 SLKQ9H2G2 1235 aaPredicted RBP25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 AS3MTQ9HBK9 375 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 SYNPO2Q9UMS6 1093 aa25.48■■□□□ 1.67
PDLIM3-203ENST00000284771 ADD1P35611 737 aaKnown RBP25.47■■□□□ 1.67
PDLIM3-203ENST00000284771 HUNKP57058 714 aa25.47■■□□□ 1.67
PDLIM3-203ENST00000284771 USP17L2Q6R6M4 530 aa25.47■■□□□ 1.67
PDLIM3-203ENST00000284771 SYNE3Q6ZMZ3 975 aa25.47■■□□□ 1.67
PDLIM3-203ENST00000284771 SPICE1Q8N0Z3 855 aa25.47■■□□□ 1.67
PDLIM3-203ENST00000284771 STAG2Q8N3U4 1231 aa25.47■■□□□ 1.67
PDLIM3-203ENST00000284771 VCPKMTQ9H867 229 aa25.47■■□□□ 1.67
PDLIM3-203ENST00000284771 NDUFB10O96000 172 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 SLC4A3P48751 1232 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 METAP2P50579 478 aaKnown RBP eCLIP25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 RCAN1P53805 252 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 GTF3C6Q969F1 213 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 SH2B1Q9NRF2 756 aaPredicted RBP25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 EMILIN3Q9NT22 766 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 MAD2L2Q9UI95 211 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 NID2Q14112 1375 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 PTPRFP10586 1907 aa25.46■■□□□ 1.67
PDLIM3-203ENST00000284771 RAD21O60216 631 aa25.45■■□□□ 1.67
PDLIM3-203ENST00000284771 GOLGA8HP0CJ92 632 aa25.45■■□□□ 1.67
PDLIM3-203ENST00000284771 SLFN13Q68D06 897 aa25.45■■□□□ 1.67
PDLIM3-203ENST00000284771 GOLGA8AA7E2F4 631 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 CALM1P0DP23 149 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 CALM2P0DP24 149 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 CALM3P0DP25 149 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 CUL4AQ13619 759 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 GRM4Q14833 912 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 CCDC83Q8IWF9 413 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 CMTR1Q8N1G2 835 aaKnown RBP25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 MAP3K14Q99558 947 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 NUP88Q99567 741 aaPredicted RBP25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 FEZ1Q99689 392 aa25.45■■□□□ 1.66
PDLIM3-203ENST00000284771 PALM3A6NDB9 673 aaPredicted RBP25.44■■□□□ 1.66
PDLIM3-203ENST00000284771 SH2D4AQ9H788 454 aa25.44■■□□□ 1.66
PDLIM3-203ENST00000284771 TLL2Q9Y6L7 1015 aa25.44■■□□□ 1.66
PDLIM3-203ENST00000284771 TMEM88BA6NKF7 163 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 CTDNEP1O95476 244 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 HMGCS2P54868 508 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 PPIL2Q13356 520 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 NTRK3Q16288 839 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 RTN1Q16799 776 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 NBPF11Q86T75 865 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 GOPCQ9HD26 462 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 KCNH4Q9UQ05 1017 aa25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 BAZ2BQ9UIF8 2168 aaKnown RBP25.43■■□□□ 1.66
PDLIM3-203ENST00000284771 FRMPD2Q68DX3 1309 aaPredicted RBP25.42■■□□□ 1.66
PDLIM3-203ENST00000284771 SLC1A4P43007 532 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms