RNA–Protein interactions for RNA: ENST00000282470.10

SPARCL1-201, Transcript of SPARC like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARCL1, Length 2,906 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-201ENST00000282470 USP49Q70CQ1 688 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 TMC6Q7Z403 805 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 CCAR2Q8N163 923 aaKnown RBP8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 ENOX1Q8TC92 643 aaKnown RBP8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 CCDC34Q96HJ3 373 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 RTFDC1Q9BY42 306 aaPredicted RBP8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 NRXN2Q9P2S2 1712 aa8.28□□□□□ -1.08
SPARCL1-201ENST00000282470 A0A087X0B3 334 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 hCG_1642624A0A1W2PR95 340 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 WNT7AO00755 349 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 SFPQP23246 707 aaKnown RBP eCLIP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 CALML3P27482 149 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 ERCC5P28715 1186 aaPredicted RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 HOXA10P31260 410 aaPredicted RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 SYCP1Q15431 976 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 TPD52L1Q16890 204 aaPredicted RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 TTC38Q5R3I4 469 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 SLC51AQ86UW1 340 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 VSTM4Q8IW00 320 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 KAT14Q9H8E8 782 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 SNED1Q8TER0 1413 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 MYH1P12882 1939 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 KLRG2A4D1S0 409 aaPredicted RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 PSDA5PKW4 1024 aaPredicted RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 USP27XA6NNY8 438 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 NPHP1O15259 732 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 USP5P45974 858 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 PLCD1P51178 756 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 UBASH3AP57075 661 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 GPSM2P81274 684 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 TFAP4Q01664 338 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 GRIK5Q16478 980 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 SLC27A3Q5K4L6 730 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 AMOTL1Q8IY63 956 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 PNMA1Q8ND90 353 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 SYMPKQ92797 1274 aaKnown RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 RPGRQ92834 1020 aaKnown RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 FAM163AQ96GL9 167 aaPredicted RBP8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 FANCLQ9NW38 375 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 JAG2Q9Y219 1238 aa8.27□□□□□ -1.09
SPARCL1-201ENST00000282470 GPR75-ASB3A0A0A6YYF3 556 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 M0R2N6 131 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 KIF2AO00139 706 aaPredicted RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 GNAQP50148 359 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 ST5P78524 1137 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 RBM10P98175 930 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 DIXDC1Q155Q3 683 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 E2F4Q16254 413 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 ARL6IP4Q66PJ3 421 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 ZNF710Q8N1W2 664 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 DAGLBQ8NCG7 672 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 CCDC112Q8NEF3 446 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 DPF2Q92785 391 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 PYM1Q9BRP8 204 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 TMX1Q9H3N1 280 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 MAD2L2Q9UI95 211 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 ANKRD31Q8N7Z5 1873 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 EP400Q96L91 3159 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 FMR1Q06787 632 aaKnown RBP eCLIP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 DPYDQ12882 1025 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 TBX2Q13207 712 aaPredicted RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 PTGDRQ13258 359 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 NOM1Q5C9Z4 860 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 CEP135Q66GS9 1140 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 E4F1Q66K89 784 aaPredicted RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 GALNT17Q6IS24 598 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 RBM17Q96I25 401 aaKnown RBP8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 EPSTI1Q96J88 318 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 MED15Q96RN5 788 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 CD209Q9NNX6 404 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 INTS13Q9NVM9 706 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 GAKO14976 1311 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 AFF2P51816 1311 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 BBOX1O75936 387 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 SERPINC1P01008 464 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 ATP2B1P20020 1258 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 NOVP48745 357 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 NLRP5P59047 1200 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 PTPN14Q15678 1187 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 C16orf86Q6ZW13 317 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 SEPT12Q8IYM1 358 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 GRAMD1CQ8IYS0 662 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 ANKRD7Q92527 254 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 PAGE5Q96GU1 130 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 GSDMAQ96QA5 445 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 CRAMP1Q96RY5 1269 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 LZTS2Q9BRK4 669 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 ZNF287Q9HBT7 754 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 PCDHA4Q9UN74 947 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 BRWD3Q6RI45 1802 aa8.26□□□□□ -1.09
SPARCL1-201ENST00000282470 C10orf71Q711Q0 1435 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 PALM3A6NDB9 673 aaPredicted RBP8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 NRDCO43847 1150 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 UFL1O94874 794 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 TUBB4AP04350 444 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 SERPINB2P05120 415 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 PLCG2P16885 1265 aa8.25□□□□□ -1.09
SPARCL1-201ENST00000282470 RASA1P20936 1047 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms