RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 ANGEL1Q9UNK9 670 aaKnown RBP12.89□□□□□ -0.35
SCLT1-201ENST00000281142 AKAP2Q9Y2D5 859 aa12.89□□□□□ -0.35
SCLT1-201ENST00000281142 ABCC12Q96J65 1359 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 CDHR2Q9BYE9 1310 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 IRS4O14654 1257 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 SERPINB2P05120 415 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 APTXQ7Z2E3 356 aaKnown RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 CMTR1Q8N1G2 835 aaKnown RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 KRI1Q8N9T8 703 aaKnown RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 NOA1Q8NC60 698 aaKnown RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 SLC26A6Q9BXS9 759 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 FAM217BQ9NTX9 383 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 ZBTB7AO95365 584 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 MORC3Q14149 939 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 NTRK3Q16288 839 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 HDXQ7Z353 690 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 IGSF22Q8N9C0 903 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 ENOX1Q8TC92 643 aaKnown RBP12.88□□□□□ -0.35
SCLT1-201ENST00000281142 CCDC102AQ96A19 550 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 TOMM22Q9NS69 142 aa12.88□□□□□ -0.35
SCLT1-201ENST00000281142 LRRIQ3A6PVS8 624 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 CDC25AP30304 524 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 LEKR1Q6ZMV7 388 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 GPR108Q9NPR9 543 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 RAB21Q9UL25 225 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 ANKRD31Q8N7Z5 1873 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 PRR5LQ6MZQ0 368 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 TPTE2Q6XPS3 522 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 PACS2Q86VP3 889 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 APPBP2Q92624 585 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 NYXQ9GZU5 481 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 PCDHB6Q9Y5E3 794 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 MYH8P13535 1937 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 A0A1B0GTH6 734 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 RNF225M0QZC1 329 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 APPP05067 770 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 GUCY2CP25092 1073 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 CASP14P31944 242 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 FXR1P51114 621 aaKnown RBP eCLIP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 TRDNQ13061 729 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 NR5A1Q13285 461 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 CASP8Q14790 479 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 NCAPH2Q6IBW4 605 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 NFXL1Q6ZNB6 911 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 MSANTD4Q8NCY6 345 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 SLC16A10Q8TF71 515 aa12.87□□□□□ -0.35
SCLT1-201ENST00000281142 FBXO2Q9UK22 296 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-201ENST00000281142 KIF5CO60282 957 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 AFMP43652 599 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 C3orf67Q6ZVT6 689 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 IQUBQ8NA54 791 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 CNBD1Q8NA66 436 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 CEP126Q9P2H0 1117 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 A0A087X0B3 334 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 GOLGA8AA7E2F4 631 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 USP5P45974 858 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 HNRNPLLQ8WVV9 542 aaKnown RBP12.86□□□□□ -0.35
SCLT1-201ENST00000281142 NCAPGQ9BPX3 1015 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 PLA2G12BQ9BX93 195 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 JRKLQ9Y4A0 524 aa12.86□□□□□ -0.35
SCLT1-201ENST00000281142 TAF1P21675 1872 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 ZBTB43O43298 467 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 MYO1BO43795 1136 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 TRIM29Q14134 588 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 LRRC31Q6UY01 552 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 MLKLQ8NB16 471 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 GDAP1L1Q96MZ0 367 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 TRIM10Q9UDY6 481 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 FAM205CA6NFA0 338 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 ACTN4O43707 911 aaKnown RBP12.85□□□□□ -0.35
SCLT1-201ENST00000281142 CCT6AP40227 531 aaKnown RBP12.85□□□□□ -0.35
SCLT1-201ENST00000281142 PPFIBP1Q86W92 1011 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 NOSTRINQ8IVI9 506 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 DIS3L2Q8IYB7 885 aaKnown RBP12.85□□□□□ -0.35
SCLT1-201ENST00000281142 CEP112Q8N8E3 955 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 STAMQ92783 540 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 PANX2Q96RD6 677 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 MYCBPQ99417 103 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-201ENST00000281142 TFR2Q9UP52 801 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 ATF5Q9Y2D1 282 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-201ENST00000281142 TACC3Q9Y6A5 838 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 COL4A1P02462 1669 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 PDE8AO60658 829 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 PLCD1P51178 756 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 ERVK-24P63145 666 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 OXER1Q8TDS5 423 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 RIN2Q8WYP3 895 aaPredicted RBP12.85□□□□□ -0.35
SCLT1-201ENST00000281142 DRC1Q96MC2 740 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 BRMS1Q9HCU9 246 aa12.85□□□□□ -0.35
SCLT1-201ENST00000281142 MYO5AQ9Y4I1 1855 aaKnown RBP12.84□□□□□ -0.35
SCLT1-201ENST00000281142 MFAP3LO75121 409 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 GYPCP04921 128 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 CTSWP56202 376 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 DPYDQ12882 1025 aa12.84□□□□□ -0.35
SCLT1-201ENST00000281142 SLC10A5Q5PT55 438 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms