RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 PIH1D3Q9NQM4 214 aaKnown RBP15.01□□□□□ -0.01
MRPS28-201ENST00000276585 TMOD4Q9NZQ9 345 aa15.01□□□□□ -0.01
MRPS28-201ENST00000276585 FLRT1Q9NZU1 646 aa15.01□□□□□ -0.01
MRPS28-201ENST00000276585 XIRP2A4UGR9 3374 aa15.01□□□□□ -0.01
MRPS28-201ENST00000276585 FAM196BA6NMK8 535 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 ADCYAP1R1P41586 468 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 SKIV2LQ15477 1246 aaKnown RBP15□□□□□ -0.01
MRPS28-201ENST00000276585 Q3C1V9 767 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 SH3D19Q5HYK7 790 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 CCDC158Q5M9N0 1113 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 WDR78Q5VTH9 848 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 SLF2Q8IX21 1173 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 RHPN1Q8TCX5 695 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 OSBPL5Q9H0X9 879 aaPredicted RBP15□□□□□ -0.01
MRPS28-201ENST00000276585 AS3MTQ9HBK9 375 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 IL1RAPL2Q9NP60 686 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 RAI14Q9P0K7 980 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 NDUFB9Q9Y6M9 179 aa15□□□□□ -0.01
MRPS28-201ENST00000276585 NAV1Q8NEY1 1877 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 USP17L5A8MUK1 530 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 GRXCR1A8MXD5 290 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 GLRX3O76003 335 aaKnown RBP14.99□□□□□ -0.01
MRPS28-201ENST00000276585 CYP2C19P33261 490 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 MTMR2Q13614 643 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 AACSQ86V21 672 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 ERC1Q8IUD2 1116 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 RBPJLQ9UBG7 517 aa14.99□□□□□ -0.01
MRPS28-201ENST00000276585 TRPV1Q8NER1 839 aa14.98□□□□□ -0.01
MRPS28-201ENST00000276585 C11orf16Q9NQ32 467 aa14.98□□□□□ -0.01
MRPS28-201ENST00000276585 LRP2BPQ9P2M1 347 aa14.98□□□□□ -0.01
MRPS28-201ENST00000276585 SMIM22K7EJ46 135 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 KIAA0355O15063 1070 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 PQBP1O60828 265 aaKnown RBP14.97□□□□□ -0.01
MRPS28-201ENST00000276585 HOXA7P31268 230 aaPredicted RBP14.97□□□□□ -0.01
MRPS28-201ENST00000276585 GSTO1P78417 241 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 HSP90AB4PQ58FF6 505 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 C1orf53Q5VUE5 145 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 SH3RF3Q8TEJ3 882 aaPredicted RBP14.97□□□□□ -0.01
MRPS28-201ENST00000276585 GTF3C2Q8WUA4 911 aaPredicted RBP14.97□□□□□ -0.01
MRPS28-201ENST00000276585 KIF1BPQ96EK5 621 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.97□□□□□ -0.01
MRPS28-201ENST00000276585 ANTXR1Q9H6X2 564 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 TMEM39AQ9NV64 488 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 MSRAQ9UJ68 235 aa14.97□□□□□ -0.01
MRPS28-201ENST00000276585 APBB1O00213 710 aa14.96□□□□□ -0.01
MRPS28-201ENST00000276585 TBC1D12O60347 775 aa14.96□□□□□ -0.01
MRPS28-201ENST00000276585 HMMRO75330 724 aa14.96□□□□□ -0.01
MRPS28-201ENST00000276585 LDHCP07864 332 aa14.96□□□□□ -0.01
MRPS28-201ENST00000276585 CYBAP13498 195 aa14.96□□□□□ -0.01
MRPS28-201ENST00000276585 PPP4CP60510 307 aa14.96□□□□□ -0.01
MRPS28-201ENST00000276585 NAA16Q6N069 864 aaPredicted RBP14.96□□□□□ -0.01
MRPS28-201ENST00000276585 IVNS1ABPQ9Y6Y0 642 aa14.96□□□□□ -0.01
MRPS28-201ENST00000276585 CHD9Q3L8U1 2897 aa14.95□□□□□ -0.02
MRPS28-201ENST00000276585 SLC15A5A6NIM6 579 aa14.95□□□□□ -0.02
MRPS28-201ENST00000276585 MAP4K4O95819 1239 aaPredicted RBP14.95□□□□□ -0.02
MRPS28-201ENST00000276585 CAP2P40123 477 aa14.95□□□□□ -0.02
MRPS28-201ENST00000276585 BACE1P56817 501 aa14.95□□□□□ -0.02
MRPS28-201ENST00000276585 CCNA1P78396 465 aa14.95□□□□□ -0.02
MRPS28-201ENST00000276585 AATFQ9NY61 560 aaKnown RBP eCLIP14.95□□□□□ -0.02
MRPS28-201ENST00000276585 U3KPZ7 1027 aaPredicted RBP14.95□□□□□ -0.02
MRPS28-201ENST00000276585 PLXNA1Q9UIW2 1896 aa14.95□□□□□ -0.02
MRPS28-201ENST00000276585 IGSF3O75054 1194 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 PTPREP23469 700 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 LRRC41Q15345 812 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 RAB30Q15771 203 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 CCDC174Q6PII3 467 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 TEX11Q8IYF3 940 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 NPLOC4Q8TAT6 608 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 KHSRPQ92945 711 aaKnown RBP eCLIP14.94□□□□□ -0.024e-8■■■□□ 15.6
MRPS28-201ENST00000276585 UIMC1Q96RL1 719 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 NKX2-4Q9H2Z4 354 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
MRPS28-201ENST00000276585 SLC28A3Q9HAS3 691 aa14.94□□□□□ -0.02
MRPS28-201ENST00000276585 ERC2O15083 957 aa14.93□□□□□ -0.02
MRPS28-201ENST00000276585 RAB11FIP3O75154 756 aa14.93□□□□□ -0.02
MRPS28-201ENST00000276585 RRP1P56182 461 aaKnown RBP14.93□□□□□ -0.02
MRPS28-201ENST00000276585 DYNLL1P63167 89 aaKnown RBP14.93□□□□□ -0.02
MRPS28-201ENST00000276585 NHLH1Q02575 133 aa14.93□□□□□ -0.02
MRPS28-201ENST00000276585 RRP1BQ14684 758 aaKnown RBP14.93□□□□□ -0.02
MRPS28-201ENST00000276585 SLC44A5Q8NCS7 719 aa14.93□□□□□ -0.02
MRPS28-201ENST00000276585 BAZ2AQ9UIF9 1905 aaKnown RBP14.93□□□□□ -0.02
MRPS28-201ENST00000276585 FLT1P17948 1338 aa14.92□□□□□ -0.02
MRPS28-201ENST00000276585 SEPT4O43236 478 aa14.92□□□□□ -0.02
MRPS28-201ENST00000276585 IDH1O75874 414 aaKnown RBP14.92□□□□□ -0.02
MRPS28-201ENST00000276585 HOXC6P09630 235 aa14.92□□□□□ -0.02
MRPS28-201ENST00000276585 PPIGQ13427 754 aaKnown RBP eCLIP14.92□□□□□ -0.02
MRPS28-201ENST00000276585 CLASRPQ8N2M8 674 aaKnown RBP14.92□□□□□ -0.02
MRPS28-201ENST00000276585 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.92□□□□□ -0.02
MRPS28-201ENST00000276585 HERVK_113Q902F9 699 aa14.92□□□□□ -0.02
MRPS28-201ENST00000276585 WDR18Q9BV38 432 aa14.92□□□□□ -0.02
MRPS28-201ENST00000276585 DNAJC18Q9H819 358 aa14.92□□□□□ -0.02
MRPS28-201ENST00000276585 MYH8P13535 1937 aa14.92□□□□□ -0.02
MRPS28-201ENST00000276585 PRR33A8MZF0 331 aa14.91□□□□□ -0.02
MRPS28-201ENST00000276585 C19orf81C9J6K1 198 aa14.91□□□□□ -0.02
MRPS28-201ENST00000276585 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
MRPS28-201ENST00000276585 CYP7A1P22680 504 aa14.91□□□□□ -0.02
MRPS28-201ENST00000276585 GRB14Q14449 540 aa14.91□□□□□ -0.02
MRPS28-201ENST00000276585 TMEM240Q5SV17 173 aa14.91□□□□□ -0.02
MRPS28-201ENST00000276585 DPP9Q86TI2 863 aa14.91□□□□□ -0.02
MRPS28-201ENST00000276585 MAGEB6Q8N7X4 407 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms