RNA–Protein interactions for RNA: ENST00000273179.9

CTDSPL-201, Transcript of CTD small phosphatase like, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-201ENST00000273179 CHKAP35790 457 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 POLE2P56282 527 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 UBE4AQ14139 1066 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 CWC27Q6UX04 472 aaKnown RBP9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC44A2Q8IWA5 706 aaPredicted RBP9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 PPP1R12CQ9BZL4 782 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 R3HDM2Q9Y2K5 976 aaKnown RBP9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 MRPL42Q9Y6G3 142 aaKnown RBP9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
CTDSPL-201ENST00000273179 EME2A4GXA9 379 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 RASSF10A6NK89 507 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 PCP4L1A6NKN8 68 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 SUZ12Q15022 739 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 CASP10Q92851 521 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC4A7Q9Y6M7 1214 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 GTPBP10A4D1E9 387 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 EVI5O60447 810 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 HDAC4P56524 1084 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 PDE4BQ07343 736 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 CENPQQ7L2Z9 268 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 ANKRD42Q8N9B4 389 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 ZNF653Q96CK0 615 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 ZFYVE16Q7Z3T8 1539 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 TEX28O15482 410 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 CHMP2AO43633 222 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 MAGEA10P43363 369 aaPredicted RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 PMS2P54278 862 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 PTK7Q13308 1070 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 CCDC113Q9H0I3 377 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 VCX3AQ9NNX9 186 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 MRPL40Q9NQ50 206 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 C2CD2Q9Y426 696 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 USH1CQ9Y6N9 552 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 PRSS47A8MTI9 375 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 C21orf2O43822 256 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 RPN1P04843 607 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 MYL3P08590 195 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 NFX1Q12986 1120 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 KCNB1Q14721 858 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 CCNG2Q16589 344 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 THEMIS2Q5TEJ8 643 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 KCNV1Q6PIU1 500 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 PPFIBP2Q8ND30 876 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 PLIN2Q99541 437 aa9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 EIF2AK1Q9BQI3 630 aaKnown RBP9.88□□□□□ -0.83
CTDSPL-201ENST00000273179 SYNDIG1LA6NDD5 238 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 TBKBP1A7MCY6 615 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 MBD4O95243 580 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC4A1P02730 911 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 CLTAP09496 248 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 HOXD11P31277 338 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC8A1P32418 973 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 CBX3Q13185 183 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 ARHGAP27Q6ZUM4 889 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 KLHDC4Q8TBB5 520 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 STK39Q9UEW8 545 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 DNAI1Q9UI46 699 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 BUB1BO60566 1050 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 IFIT2P09913 472 aaKnown RBP9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 GYS1P13807 737 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 PDE6CP51160 858 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 TCEAL1Q15170 157 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 CFAP157Q5JU67 520 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 UNC5DQ6UXZ4 953 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 PHLDB2Q86SQ0 1253 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 ZNF512BQ96KM6 892 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 RBSNQ9H1K0 784 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 TRPC6Q9Y210 931 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC4A4Q9Y6R1 1079 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 MYZAPP0CAP1 466 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 POTEJP0CG39 1038 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 SLC8A3P57103 927 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 GALNT17Q6IS24 598 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 ZNF354CQ86Y25 554 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 TRIM58Q8NG06 486 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 CUL5Q93034 780 aa9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.87□□□□□ -0.83
CTDSPL-201ENST00000273179 RPL17P18621 184 aaKnown RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 NLRP9Q7RTR0 991 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 ATP10AO60312 1499 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 UNC13BO14795 1591 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 TLDC2A0PJX2 215 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 RFC1P35251 1148 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 KLC1Q07866 573 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 KIF5AQ12840 1032 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 GRIK3Q13003 919 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 Q3C1V9 767 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 CCDC170Q8IYT3 715 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 ATP7AQ04656 1500 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 hCG_1984214I3L0E3 225 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 PTGS2P35354 604 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 PLIN5Q00G26 463 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 KRT27Q7Z3Y8 459 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 RSPH3Q86UC2 560 aa9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 CCDC84Q86UT8 332 aaPredicted RBP9.86□□□□□ -0.83
CTDSPL-201ENST00000273179 LPIN2Q92539 896 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms