RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 KCTD19Q17RG1 926 aaPredicted RBP19.04■□□□□ 0.64
SQLE-201ENST00000265896 TTC38Q5R3I4 469 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 RSRC2Q7L4I2 434 aaKnown RBP19.04■□□□□ 0.64
SQLE-201ENST00000265896 GPR161Q8N6U8 529 aaKnown RBP19.04■□□□□ 0.64
SQLE-201ENST00000265896 ESR2Q92731 530 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 UIMC1Q96RL1 719 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 XDHP47989 1333 aa19.04■□□□□ 0.64
SQLE-201ENST00000265896 SRBD1Q8N5C6 995 aaKnown RBP19.03■□□□□ 0.64
SQLE-201ENST00000265896 ZSCAN10Q96SZ4 725 aaPredicted RBP19.03■□□□□ 0.64
SQLE-201ENST00000265896 ANKZF1Q9H8Y5 726 aa19.03■□□□□ 0.64
SQLE-201ENST00000265896 ABCB6Q9NP58 842 aa19.03■□□□□ 0.64
SQLE-201ENST00000265896 SLAIN2Q9P270 581 aa19.03■□□□□ 0.64
SQLE-201ENST00000265896 MFAP3LO75121 409 aa19.03■□□□□ 0.64
SQLE-201ENST00000265896 GSPT2Q8IYD1 628 aaKnown RBP19.03■□□□□ 0.64
SQLE-201ENST00000265896 CCDC196A0A1B0GTZ2 297 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 CATIPQ7Z7H3 387 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 SRRTQ9BXP5 876 aaKnown RBP19.02■□□□□ 0.64
SQLE-201ENST00000265896 MROH5Q6ZUA9 1318 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 CDHR2Q9BYE9 1310 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 NUP188Q5SRE5 1749 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 NKRFO15226 690 aaKnown RBP eCLIP19.02■□□□□ 0.64
SQLE-201ENST00000265896 KRT9P35527 623 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 ATP6V1AP38606 617 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 TXLNAP40222 546 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 VSNL1P62760 191 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 UBXN1Q04323 297 aa19.02■□□□□ 0.64
SQLE-201ENST00000265896 BBXQ8WY36 941 aaPredicted RBP19.02■□□□□ 0.64
SQLE-201ENST00000265896 KLK7P49862 253 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 PMS1P54277 932 aaKnown RBP19.02■□□□□ 0.63
SQLE-201ENST00000265896 PPARDQ03181 441 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 SEC23AQ15436 765 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 NT5DC1Q5TFE4 455 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 CCDC102AQ96A19 550 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 RABEP2Q9H5N1 569 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 LCMT1Q9UIC8 334 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 CEP131Q9UPN4 1083 aa19.02■□□□□ 0.63
SQLE-201ENST00000265896 STK36Q9NRP7 1315 aa19.01■□□□□ 0.63
SQLE-201ENST00000265896 ALX1Q15699 326 aa19.01■□□□□ 0.63
SQLE-201ENST00000265896 ZNF384Q8TF68 577 aa19.01■□□□□ 0.63
SQLE-201ENST00000265896 HPS3Q969F9 1004 aa19.01■□□□□ 0.63
SQLE-201ENST00000265896 CAPN2P17655 700 aa19.01■□□□□ 0.63
SQLE-201ENST00000265896 FILIP1LQ4L180 1135 aa19.01■□□□□ 0.63
SQLE-201ENST00000265896 NELFBQ8WX92 580 aa19.01■□□□□ 0.63
SQLE-201ENST00000265896 JAKMIP3Q5VZ66 844 aa19■□□□□ 0.63
SQLE-201ENST00000265896 FOXR1Q6PIV2 292 aa19■□□□□ 0.63
SQLE-201ENST00000265896 PSMB7Q99436 277 aa19■□□□□ 0.63
SQLE-201ENST00000265896 ADAM21Q9UKJ8 722 aa19■□□□□ 0.63
SQLE-201ENST00000265896 TRIM66O15016 1216 aa19■□□□□ 0.63
SQLE-201ENST00000265896 FAM193AP78312 1265 aa19■□□□□ 0.63
SQLE-201ENST00000265896 SRGAP1Q7Z6B7 1085 aa19■□□□□ 0.63
SQLE-201ENST00000265896 DRC1Q96MC2 740 aa19■□□□□ 0.63
SQLE-201ENST00000265896 PHF20Q9BVI0 1012 aa19■□□□□ 0.63
SQLE-201ENST00000265896 RABGGTAQ92696 567 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 CTAGE9A4FU28 777 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 GOLGA8HP0CJ92 632 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 XBP1P17861 261 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 GTF2E1P29083 439 aaPredicted RBP18.99■□□□□ 0.63
SQLE-201ENST00000265896 NPY5RQ15761 445 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 FCHSD1Q86WN1 690 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 ZNF34Q8IZ26 560 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 RIN2Q8WYP3 895 aaPredicted RBP18.99■□□□□ 0.63
SQLE-201ENST00000265896 ZNF512BQ96KM6 892 aaPredicted RBP18.99■□□□□ 0.63
SQLE-201ENST00000265896 FAN1Q9Y2M0 1017 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 DUSP10Q9Y6W6 482 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 PRCPP42785 496 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 TROAPQ12815 778 aa18.99■□□□□ 0.63
SQLE-201ENST00000265896 RNF41Q9H4P4 317 aaPredicted RBP18.99■□□□□ 0.63
SQLE-201ENST00000265896 KCNJ18B7U540 433 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 ERCC5P28715 1186 aaPredicted RBP18.98■□□□□ 0.63
SQLE-201ENST00000265896 PRDX5P30044 214 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 CRKLP46109 303 aaKnown RBP18.98■□□□□ 0.63
SQLE-201ENST00000265896 FUT2Q10981 343 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 KCNJ12Q14500 433 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 IQCA1Q86XH1 822 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 STAG2Q8N3U4 1231 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 CDC23Q9UJX2 597 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 FAM205AQ6ZU69 1335 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 ADAMTS2O95450 1211 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 CYP27A1Q02318 531 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 RAD51AP2Q09MP3 1159 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 SPATA20Q8TB22 786 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 PCMTD1Q96MG8 357 aaPredicted RBP18.98■□□□□ 0.63
SQLE-201ENST00000265896 ABHD10Q9NUJ1 306 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 TMEM51Q9NW97 253 aa18.98■□□□□ 0.63
SQLE-201ENST00000265896 TNS2Q63HR2 1409 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 CDKAL1Q5VV42 579 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.97■□□□□ 0.63
SQLE-201ENST00000265896 RNF26Q9BY78 433 aaPredicted RBP18.97■□□□□ 0.63
SQLE-201ENST00000265896 PKD1L3Q7Z443 1732 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 ZNF335Q9H4Z2 1342 aaPredicted RBP18.97■□□□□ 0.63
SQLE-201ENST00000265896 FAM170AA1A519 330 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 GOLGA6L9A6NEM1 432 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 TNNT3P45378 269 aaPredicted RBP18.97■□□□□ 0.63
SQLE-201ENST00000265896 COPB1P53618 953 aaKnown RBP18.97■□□□□ 0.63
SQLE-201ENST00000265896 CCDC152Q4G0S7 254 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 KANK3Q6NY19 840 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 CTR9Q6PD62 1173 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 ATRNO75882 1429 aa18.97■□□□□ 0.63
SQLE-201ENST00000265896 TTC26A0AVF1 554 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms