RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 C12orf60Q5U649 245 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 ADALQ6DHV7 355 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 CPLX3Q8WVH0 158 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 DEF6Q9H4E7 631 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 ZNRF3Q9ULT6 936 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 LMO7Q8WWI1 1683 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 ESPNB1AK53 854 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 EXOSC10Q01780 885 aaKnown RBP16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 NR5A1Q13285 461 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 FBXO11Q86XK2 927 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 PIGSQ96S52 555 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 TMEM47Q9BQJ4 181 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 CLSTN2Q9H4D0 955 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 GH2P01242 217 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 RASGRP4Q8TDF6 673 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 FTOQ9C0B1 505 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 STX17P56962 302 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 FKBP15Q5T1M5 1219 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 ARID3AQ99856 593 aa16.38■□□□□ 0.21
PDLIM2-201ENST00000265810 ABCC6O95255 1503 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 PLCD1P51178 756 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 PPP4R3AQ6IN85 833 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 POTEAQ6S8J7 498 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 ERCC4Q92889 916 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 CHMP2AO43633 222 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 KIF23Q02241 960 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 FERMT2Q96AC1 680 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 SCLT1Q96NL6 688 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 LRWD1Q9UFC0 647 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 FLOT1O75955 427 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 MYCLP12524 364 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 CALCRLQ16602 461 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 CEP95Q96GE4 821 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 PCDHA7Q9UN72 937 aa16.37■□□□□ 0.21
PDLIM2-201ENST00000265810 WWC2Q6AWC2 1192 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 TMC6Q7Z403 805 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 LUZP1Q86V48 1076 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 FAM177A1Q8N128 213 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 CPVLQ9H3G5 476 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 WDR19Q8NEZ3 1342 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 PRPF3O43395 683 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 ALAS1P13196 640 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 CCT6AP40227 531 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 SLIT2O94813 1529 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 CDC27P30260 824 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 CCDC40Q4G0X9 1142 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 NOM1Q5C9Z4 860 aaKnown RBP16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 VGLL2Q8N8G2 317 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 STAMQ92783 540 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 PSMA7O14818 248 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 NR1I2O75469 434 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 SYCP3Q8IZU3 236 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 CLIC6Q96NY7 704 aa16.36■□□□□ 0.21
PDLIM2-201ENST00000265810 NEMFO60524 1076 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 BMP3P12645 472 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 IRX3P78415 501 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 TCERG1LQ5VWI1 586 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 COA7Q96BR5 231 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 FOXP1Q9H334 677 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 SUPT20HL1Q3ZLR7 823 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 B4DLN1 442 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 N4BP3O15049 544 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 MMP1P03956 469 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 UBASH3AP57075 661 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 GALNT17Q6IS24 598 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 TMEM179Q6ZVK1 233 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 AMNQ9BXJ7 453 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 FLT1P17948 1338 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 ORC4O43929 436 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 NT5C2P49902 561 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 SEPT2Q15019 361 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 SYCP1Q15431 976 aa16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 ALDH8A1Q9H2A2 487 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-201ENST00000265810 PFKFB1P16118 471 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 PTGDRQ13258 359 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 TMTC3Q6ZXV5 915 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 SV2BQ7L1I2 683 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 ZSCAN30Q86W11 494 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 SNX29Q8TEQ0 813 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 RBSNQ9H1K0 784 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 RNF181Q9P0P0 153 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 CT47A1Q5JQC4 288 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 STXBP4Q6ZWJ1 553 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 SGMS1Q86VZ5 419 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 CCDC125Q86Z20 511 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 RTEL1Q9NZ71 1219 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 DISP2A7MBM2 1401 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 CCP110O43303 1012 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 CDC42EP5Q6NZY7 148 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 PDCL3Q9H2J4 239 aa16.34■□□□□ 0.21
PDLIM2-201ENST00000265810 USP17L5A8MUK1 530 aa16.33■□□□□ 0.21
PDLIM2-201ENST00000265810 NCAPH2Q6IBW4 605 aa16.33■□□□□ 0.21
PDLIM2-201ENST00000265810 RESTQ13127 1097 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms