RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 TRIM47Q96LD4 638 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 TXNRD2Q9NNW7 524 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 PPP4R2Q9NY27 417 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 MTMR4Q9NYA4 1195 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 RBPJLQ9UBG7 517 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 PTPN22Q9Y2R2 807 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 RAD50Q92878 1312 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 CASP8AP2Q9UKL3 1982 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 SGSM2O43147 1006 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 KIF22Q14807 665 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 FAM110CQ1W6H9 321 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 Q3C1V9 767 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 BMP2KLQ5H9B9 411 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 FBXO46Q6PJ61 603 aaPredicted RBP10□□□□□ -0.81
ERCC8-201ENST00000265038 SPICE1Q8N0Z3 855 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 RUFY2Q8WXA3 655 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 LPAR1Q92633 364 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 MKL1Q969V6 931 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 SH2D4AQ9H788 454 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 MORF4L1Q9UBU8 362 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 CLIP2Q9UDT6 1046 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 PLIN4Q96Q06 1357 aa10□□□□□ -0.81
ERCC8-201ENST00000265038 ZNF213O14771 459 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 CNMDO75829 334 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 PTH1RQ03431 593 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 ARHGEF6Q15052 776 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 AKNAD1Q5T1N1 836 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 IFFO2Q5TF58 517 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 STAG1Q8WVM7 1258 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 IL17RBQ9NRM6 502 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 HPS5Q9UPZ3 1129 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 BAZ2AQ9UIF9 1905 aaKnown RBP9.99□□□□□ -0.81
ERCC8-201ENST00000265038 TSPY2A6NKD2 308 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 SPDYE16A6NNV3 312 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-201ENST00000265038 RANBP6O60518 1105 aaKnown RBP9.99□□□□□ -0.81
ERCC8-201ENST00000265038 NMT2O60551 498 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 FMNL1O95466 1100 aaPredicted RBP9.99□□□□□ -0.81
ERCC8-201ENST00000265038 TTLL1O95922 423 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 LBX2Q6XYB7 198 aa9.99□□□□□ -0.81
ERCC8-201ENST00000265038 F5H6K3 240 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 WDR46O15213 610 aaKnown RBP9.98□□□□□ -0.81
ERCC8-201ENST00000265038 GNRH1P01148 92 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 NOVP48745 357 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 FCGRTP55899 365 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 KLRC3Q07444 240 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 COG2Q14746 738 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 RRP12Q5JTH9 1297 aaKnown RBP9.98□□□□□ -0.81
ERCC8-201ENST00000265038 MFSD6Q6ZSS7 791 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 GPRC5AQ8NFJ5 357 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 GTF3C2Q8WUA4 911 aaPredicted RBP9.98□□□□□ -0.81
ERCC8-201ENST00000265038 GOPCQ9HD26 462 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 TOMM22Q9NS69 142 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 SRRDQ9UH36 339 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 CTNNA3Q9UI47 895 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 PTCH2Q9Y6C5 1203 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 ATAD5Q96QE3 1844 aa9.98□□□□□ -0.81
ERCC8-201ENST00000265038 NDUFB10O96000 172 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 PCP11498 1178 aaKnown RBP9.97□□□□□ -0.81
ERCC8-201ENST00000265038 DSG3P32926 999 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 FAM83BQ5T0W9 1011 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 LRRC47Q8N1G4 583 aaKnown RBP9.97□□□□□ -0.81
ERCC8-201ENST00000265038 PAGR1Q9BTK6 254 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 TANGO6Q9C0B7 1094 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 TCP11L1Q9NUJ3 509 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 HOXC10Q9NYD6 342 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 BTBD7Q9P203 1132 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 SYNPO2Q9UMS6 1093 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 GABRQQ9UN88 632 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 RABGAP1Q9Y3P9 1069 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 NEDD4P46934 1319 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 LOC285556D6RIA3 1793 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 RAD21O60216 631 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 HOXD10P28358 340 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 PRMT2P55345 433 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 ERVK-9P63128 1117 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 ERVK-24P63145 666 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 PRKCZQ05513 592 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 IMMTQ16891 758 aaKnown RBP9.97□□□□□ -0.81
ERCC8-201ENST00000265038 NUP88Q99567 741 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-201ENST00000265038 ESYT1Q9BSJ8 1104 aa9.97□□□□□ -0.81
ERCC8-201ENST00000265038 RNF41Q9H4P4 317 aaPredicted RBP9.97□□□□□ -0.81
ERCC8-201ENST00000265038 PTPRFP10586 1907 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 CCDC85CA6NKD9 419 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 TNPO2O14787 897 aaKnown RBP9.96□□□□□ -0.81
ERCC8-201ENST00000265038 CAPN15O75808 1086 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 FLOT1O75955 427 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 GMCL1P1Q8NEA9 526 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 MAP4K1Q92918 833 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 ATG4CQ96DT6 458 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 LSG1Q9H089 658 aaKnown RBP9.96□□□□□ -0.81
ERCC8-201ENST00000265038 PORCNQ9H237 461 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 FBXO28Q9NVF7 368 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 STX8Q9UNK0 236 aa9.96□□□□□ -0.81
ERCC8-201ENST00000265038 CYP21A2P08686 494 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 PPP4R3BQ5MIZ7 849 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 SLFN13Q68D06 897 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 ESR2Q92731 530 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 GJD2Q9UKL4 321 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 ADAMTS5Q9UNA0 930 aa9.95□□□□□ -0.82
ERCC8-201ENST00000265038 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms