RNA–Protein interactions for RNA: ENST00000263956.7

GTF3C3-201, Transcript of general transcription factor IIIC subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C3, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-201ENST00000263956 RIOK1Q9BRS2 568 aaKnown RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 RNF26Q9BY78 433 aaPredicted RBP9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 TMEM39BQ9GZU3 492 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 KCNQ5Q9NR82 932 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 PNMA3Q9UL41 463 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 CCPG1Q9ULG6 757 aa9.45□□□□□ -0.9
GTF3C3-201ENST00000263956 WWC2Q6AWC2 1192 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 PPP4R3AQ6IN85 833 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 USP17L2Q6R6M4 530 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 MB21D2Q8IYB1 491 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 DCAF4Q8WV16 495 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 MRIQ9BWK5 157 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 PCDHA1Q9Y5I3 950 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 CRYBG1Q9Y4K1 1723 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 TPM1P09493 284 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 EEF2P13639 858 aaKnown RBP9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 MAP3K9P80192 1104 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 SYDE2Q5VT97 1194 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 GALNT17Q6IS24 598 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 PIK3AP1Q6ZUJ8 805 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 PSTPIP2Q9H939 334 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 GDPD2Q9HCC8 539 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 EPB41L4AQ9HCS5 686 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 BIN2Q9UBW5 565 aaPredicted RBP9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 ABCA3Q99758 1704 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 MCM7P33993 719 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 AMPD3Q01432 767 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 MKRN3Q13064 507 aaKnown RBP9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 C16orf86Q6ZW13 317 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 KCNJ14Q9UNX9 436 aa9.44□□□□□ -0.9
GTF3C3-201ENST00000263956 SPTLC2O15270 562 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 PLCD1P51178 756 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 SCRN1Q12765 414 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 NBPF9Q3BBW0 867 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 CYB5R4Q7L1T6 521 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 PCMTD1Q96MG8 357 aaPredicted RBP9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 PPP2R3BQ9Y5P8 575 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 GCOM1H8Y6P7 765 aaPredicted RBP9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 POLR2MP0CAP2 368 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 IFNAR1P17181 557 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 SLC16A2P36021 539 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 NFIAQ12857 509 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 ARHGEF6Q15052 776 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 PRAMEF18Q5VWM3 479 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 FAM83AQ86UY5 434 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 NCAPG2Q86XI2 1143 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 ANKRD35Q8N283 1001 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 ENAHQ8N8S7 591 aaPredicted RBP9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 CNNM3Q8NE01 707 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 NOC3LQ8WTT2 800 aaKnown RBP9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 OTUD5Q96G74 571 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 CCDC192P0DO97 292 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 MYCLP12524 364 aaPredicted RBP9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 DTHD1Q6ZMT9 781 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 CKAP2LQ8IYA6 745 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 LRRC27Q9C0I9 530 aa9.43□□□□□ -0.9
GTF3C3-201ENST00000263956 F5H6K3 240 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 EPS15P42566 896 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 KLRC3Q07444 240 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 SPDYE2Q495Y8 402 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 KRT79Q5XKE5 535 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 BLIDQ8IZY5 108 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 GPHNQ9NQX3 736 aaPredicted RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 GINM1Q9NU53 330 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 hCG_1984214I3L0E3 225 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 ZNF174Q15697 407 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 RCSD1Q6JBY9 416 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 TRMT1LQ7Z2T5 733 aaKnown RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 PDILTQ8N807 584 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 ZNF713Q8N859 430 aaPredicted RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 RBM46Q8TBY0 533 aaKnown RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 SCLT1Q96NL6 688 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 PANK2Q9BZ23 570 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 HOXC10Q9NYD6 342 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 GPRC5DQ9NZD1 345 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 WNT10BO00744 389 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 FOSP01100 380 aaPredicted RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 RCAN1P53805 252 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 UBE2HP62256 183 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 KCTD2Q14681 263 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 KANK3Q6NY19 840 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 USP50Q70EL3 339 aaPredicted RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 DDX19AQ9NUU7 478 aaKnown RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 MAGEC2Q9UBF1 373 aaPredicted RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 ANAPC4Q9UJX5 808 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 SCAF8Q9UPN6 1271 aaKnown RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 C4BP0C0L5 1744 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 TCRBV5S4A2TA0A5A2 114 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 CTAGE5O15320 804 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 NMT2O60551 498 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 CTNND1O60716 968 aaKnown RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 FMNL1O95466 1100 aaPredicted RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 MAP3K11Q16584 847 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 FKBP1CQ5VVH2 108 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 FASTKD5Q7L8L6 764 aaKnown RBP9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 ANKRD13AQ8IZ07 590 aa9.42□□□□□ -0.9
GTF3C3-201ENST00000263956 GPKOWQ92917 476 aaPredicted RBP eCLIP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms