RNA–Protein interactions for RNA: ENST00000263071.8

SCARF1-201, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCARF1, Length 3,443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-201ENST00000263071 APOA5Q6Q788 366 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 BRAPQ7Z569 592 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 METTL16Q86W50 562 aaKnown RBP15.91■□□□□ 0.14
SCARF1-201ENST00000263071 SPDYE1Q8NFV5 336 aaPredicted RBP15.91■□□□□ 0.14
SCARF1-201ENST00000263071 RSRC1Q96IZ7 334 aaKnown RBP15.91■□□□□ 0.14
SCARF1-201ENST00000263071 VPS54Q9P1Q0 977 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 LRP2BPQ9P2M1 347 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 UTYO14607 1347 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 SSBP05455 408 aaKnown RBP eCLIP15.91■□□□□ 0.14
SCARF1-201ENST00000263071 ZNF569Q5MCW4 686 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 OXER1Q8TDS5 423 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 KLC4Q9NSK0 619 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 POLR3EQ9NVU0 708 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 PCDHB6Q9Y5E3 794 aa15.91■□□□□ 0.14
SCARF1-201ENST00000263071 TEX33O43247 280 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 RANBP6O60518 1105 aaKnown RBP15.9■□□□□ 0.14
SCARF1-201ENST00000263071 CCDC181Q5TID7 509 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 TRIM22Q8IYM9 498 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 VPS16Q9H269 839 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 NEDD4P46934 1319 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 ZNF174Q15697 407 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 RABL6Q3YEC7 729 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-201ENST00000263071 ASAP1Q9ULH1 1129 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 UBR1Q8IWV7 1749 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 H7C1W4 665 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 RSRC2Q7L4I2 434 aaKnown RBP15.9■□□□□ 0.14
SCARF1-201ENST00000263071 MB21D2Q8IYB1 491 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-201ENST00000263071 ZCRB1Q8TBF4 217 aaKnown RBP15.9■□□□□ 0.14
SCARF1-201ENST00000263071 SDR42E1Q8WUS8 393 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 BIN2Q9UBW5 565 aaPredicted RBP15.9■□□□□ 0.14
SCARF1-201ENST00000263071 ANAPC4Q9UJX5 808 aa15.9■□□□□ 0.14
SCARF1-201ENST00000263071 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 FAM208AQ9UK61 1670 aaKnown RBP15.89■□□□□ 0.13
SCARF1-201ENST00000263071 A0A1W2PQ27 194 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 A0A1W2PQ64 194 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 A0A1W2PQD8 194 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 ECEL1O95672 775 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 HLFQ16534 295 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 EPSTI1Q96J88 318 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 PCMTD1Q96MG8 357 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-201ENST00000263071 OSBPL5Q9H0X9 879 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-201ENST00000263071 ZSWIM5Q9P217 1185 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 RTN2O75298 545 aa15.89■□□□□ 0.13
SCARF1-201ENST00000263071 ALDH8A1Q9H2A2 487 aaPredicted RBP15.89■□□□□ 0.13
SCARF1-201ENST00000263071 CYP2D7A0A087X1C5 515 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 PPP1R12BO60237 982 aaPredicted RBP15.88■□□□□ 0.13
SCARF1-201ENST00000263071 CDKL5O76039 1030 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 DNA2P51530 1060 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 C1QTNF12Q5T7M4 302 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 KRI1Q8N9T8 703 aaKnown RBP15.88■□□□□ 0.13
SCARF1-201ENST00000263071 L1RE1Q9UN81 338 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 TFR2Q9UP52 801 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 ABCD1P33897 745 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 MRPS25P82663 173 aaKnown RBP15.88■□□□□ 0.13
SCARF1-201ENST00000263071 UBAC1Q9BSL1 405 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 SLC4A4Q9Y6R1 1079 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 FAM170AA1A519 330 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 PRPHP41219 470 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 MAP3K9P80192 1104 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 POSTNQ15063 836 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 TRIM65Q6PJ69 517 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 MFSD6Q6ZSS7 791 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 ANKRD23Q86SG2 305 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 C3orf20Q8ND61 904 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 FAM76AQ8TAV0 307 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 HNRNPLLQ8WVV9 542 aaKnown RBP15.88■□□□□ 0.13
SCARF1-201ENST00000263071 CAPZA3Q96KX2 299 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 MRFAP1Q9Y605 127 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 NWD1Q149M9 1564 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 PALLDQ8WX93 1383 aa15.88■□□□□ 0.13
SCARF1-201ENST00000263071 VWA3AA6NCI4 1184 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 ZMYND10O75800 440 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 KCNB1Q14721 858 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 B4GALNT4Q76KP1 1039 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 CDC5LQ99459 802 aaKnown RBP15.87■□□□□ 0.13
SCARF1-201ENST00000263071 FOXP2O15409 715 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 PPFIA2O75334 1257 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 PYGLP06737 847 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 RANBP1P43487 201 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 ACRBPQ8NEB7 543 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 NUP88Q99567 741 aaPredicted RBP15.87■□□□□ 0.13
SCARF1-201ENST00000263071 TMOD3Q9NYL9 352 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 HOOK1Q9UJC3 728 aaKnown RBP15.87■□□□□ 0.13
SCARF1-201ENST00000263071 BMP6P22004 513 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 SNCBQ16143 134 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 RTN1Q16799 776 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 BICDL1Q6ZP65 573 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 IGSF22Q8N9C0 903 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.87■□□□□ 0.13
SCARF1-201ENST00000263071 MAN1B1Q9UKM7 699 aa15.87■□□□□ 0.13
SCARF1-201ENST00000263071 NDUFAB1O14561 156 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 PDE6AP16499 860 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 ARHGAP25P42331 645 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 VSTM4Q8IW00 320 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 CCDC24Q8N4L8 307 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 KDM4CQ9H3R0 1056 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 IRS4O14654 1257 aaPredicted RBP15.86■□□□□ 0.13
SCARF1-201ENST00000263071 ENC1O14682 589 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 WTAPQ15007 396 aa15.86■□□□□ 0.13
SCARF1-201ENST00000263071 AMOTL1Q8IY63 956 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms