RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CTDP1Q9Y5B0 961 aaPredicted RBP14.71□□□□□ -0.05
TRAF4-202ENST00000262396 MYO5AQ9Y4I1 1855 aaKnown RBP14.71□□□□□ -0.05
TRAF4-202ENST00000262396 USP17L12C9JPN9 530 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 USP17L21D6R901 530 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 MSCO60682 206 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 SYN1P17600 705 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 UBE3CQ15386 1083 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 LRRFIP1Q32MZ4 808 aaKnown RBP14.7□□□□□ -0.06
TRAF4-202ENST00000262396 MAP3K21Q5TCX8 1036 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 MB21D1Q8N884 522 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 MKNK2Q9HBH9 465 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 ECHDC1Q9NTX5 307 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 BTBD7Q9P203 1132 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 FOCADQ5VW36 1801 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 CEP290O15078 2479 aa14.7□□□□□ -0.06
TRAF4-202ENST00000262396 A0A1W2PPC1 479 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 STRNO43815 780 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 CNMDO75829 334 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 APPP05067 770 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 AKR1B1P15121 316 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 GUCY1A2P33402 732 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 CDK8P49336 464 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 SLFNL1Q499Z3 407 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 LBX2Q6XYB7 198 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 STK11IPQ8N1F8 1099 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 SPATC1LQ9H0A9 340 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 GOPCQ9HD26 462 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 PRKAG2Q9UGJ0 569 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 CDK5RAP2Q96SN8 1893 aa14.69□□□□□ -0.06
TRAF4-202ENST00000262396 DOCK3Q8IZD9 2030 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 CYP2D7A0A087X1C5 515 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 A0A1W2PRG0 241 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 MINDY4BA8MYZ0 360 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 ERCC3P19447 782 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 ADORA2AP29274 412 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 CYP2C19P33261 490 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 EVX2Q03828 476 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 GRB14Q14449 540 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 C12orf60Q5U649 245 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 USP6NLQ92738 828 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 MOV10L1Q9BXT6 1211 aaKnown RBP14.68□□□□□ -0.06
TRAF4-202ENST00000262396 SENP6Q9GZR1 1112 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-202ENST00000262396 MROH8Q9H579 483 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 VCPKMTQ9H867 229 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 KANSL2Q9H9L4 492 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 ARPP21Q9UBL0 812 aaPredicted RBP14.68□□□□□ -0.06
TRAF4-202ENST00000262396 DDX20Q9UHI6 824 aaKnown RBP14.68□□□□□ -0.06
TRAF4-202ENST00000262396 ISY1Q9ULR0 285 aaKnown RBP14.68□□□□□ -0.06
TRAF4-202ENST00000262396 TMX2Q9Y320 296 aa14.68□□□□□ -0.06
TRAF4-202ENST00000262396 WDR46O15213 610 aaKnown RBP14.67□□□□□ -0.06
TRAF4-202ENST00000262396 DSG3P32926 999 aa14.67□□□□□ -0.06
TRAF4-202ENST00000262396 TDO2P48775 406 aa14.67□□□□□ -0.06
TRAF4-202ENST00000262396 C20orf194Q5TEA3 1177 aa14.67□□□□□ -0.06
TRAF4-202ENST00000262396 CLEC10AQ8IUN9 316 aa14.67□□□□□ -0.06
TRAF4-202ENST00000262396 LBHD1Q9BQE6 289 aaPredicted RBP14.67□□□□□ -0.06
TRAF4-202ENST00000262396 UBE2OQ9C0C9 1292 aaKnown RBP14.67□□□□□ -0.06
TRAF4-202ENST00000262396 ZNF287Q9HBT7 754 aa14.67□□□□□ -0.06
TRAF4-202ENST00000262396 NAV1Q8NEY1 1877 aa14.67□□□□□ -0.06
TRAF4-202ENST00000262396 KBTBD13C9JR72 458 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 FCER1AP12319 257 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 EEF2P13639 858 aaKnown RBP14.66□□□□□ -0.06
TRAF4-202ENST00000262396 SLC4A3P48751 1232 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 C16orf86Q6ZW13 317 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 ARRDC4Q8NCT1 418 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 SHCBP1Q8NEM2 672 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 NPLOC4Q8TAT6 608 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 ATG4CQ96DT6 458 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 PUS7LQ9H0K6 701 aaKnown RBP14.66□□□□□ -0.06
TRAF4-202ENST00000262396 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
TRAF4-202ENST00000262396 ERC2O15083 957 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 SLC25A27O95847 323 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 HOXC6P09630 235 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 ATN1P54259 1190 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-202ENST00000262396 KCTD2Q14681 263 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 LHX8Q68G74 356 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 CTR9Q6PD62 1173 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 ZNF444Q8N0Y2 327 aaPredicted RBP14.65□□□□□ -0.06
TRAF4-202ENST00000262396 MMP19Q99542 508 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 NACAP1Q9BZK3 213 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 FLRT1Q9NZU1 646 aa14.65□□□□□ -0.06
TRAF4-202ENST00000262396 ZFYP08048 801 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-202ENST00000262396 SLC3A2P08195 630 aaKnown RBP14.64□□□□□ -0.07
TRAF4-202ENST00000262396 GNAT2P19087 354 aa14.64□□□□□ -0.07
TRAF4-202ENST00000262396 MAGEA10P43363 369 aaPredicted RBP14.64□□□□□ -0.07
TRAF4-202ENST00000262396 ANO1Q5XXA6 986 aa14.64□□□□□ -0.07
TRAF4-202ENST00000262396 OLFML2BQ68BL8 750 aa14.64□□□□□ -0.07
TRAF4-202ENST00000262396 POTEEQ6S8J3 1075 aa14.64□□□□□ -0.07
TRAF4-202ENST00000262396 KBTBD3Q8NAB2 608 aa14.64□□□□□ -0.07
TRAF4-202ENST00000262396 APPBP2Q92624 585 aa14.64□□□□□ -0.07
TRAF4-202ENST00000262396 RNF113AO15541 343 aaKnown RBP14.63□□□□□ -0.07
TRAF4-202ENST00000262396 CHGBP05060 677 aa14.63□□□□□ -0.07
TRAF4-202ENST00000262396 BMP8BP34820 402 aa14.63□□□□□ -0.07
TRAF4-202ENST00000262396 COPB2P35606 906 aa14.63□□□□□ -0.07
TRAF4-202ENST00000262396 LRRC26Q2I0M4 334 aa14.63□□□□□ -0.07
TRAF4-202ENST00000262396 FAM83BQ5T0W9 1011 aa14.63□□□□□ -0.07
TRAF4-202ENST00000262396 TSHZ3Q63HK5 1081 aa14.63□□□□□ -0.07
TRAF4-202ENST00000262396 STRBPQ96SI9 672 aaKnown RBP14.63□□□□□ -0.07
TRAF4-202ENST00000262396 PFASO15067 1338 aa14.63□□□□□ -0.07
TRAF4-202ENST00000262396 DNM1LO00429 736 aa14.62□□□□□ -0.07
TRAF4-202ENST00000262396 STAT3P40763 770 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms