RNA–Protein interactions for RNA: ENST00000260956.8

SSB-201, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-201ENST00000260956 ERICH2A1L162 156 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 DEXIO95424 95 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 CYP2D6P10635 497 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 SF3A1Q15459 793 aaKnown RBP20.39■□□□□ 0.85
SSB-201ENST00000260956 PKN1Q16512 942 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 STX1AQ16623 288 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 MAP1SQ66K74 1059 aaPredicted RBP20.39■□□□□ 0.85
SSB-201ENST00000260956 SASS6Q6UVJ0 657 aa20.39■□□□□ 0.85
SSB-201ENST00000260956 RBM46Q8TBY0 533 aaKnown RBP20.39■□□□□ 0.85
SSB-201ENST00000260956 RNF26Q9BY78 433 aaPredicted RBP20.39■□□□□ 0.85
SSB-201ENST00000260956 ARPP21Q9UBL0 812 aaPredicted RBP20.39■□□□□ 0.85
SSB-201ENST00000260956 MSNP26038 577 aaKnown RBP20.38■□□□□ 0.85
SSB-201ENST00000260956 ZNF165P49910 485 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 TOB1P50616 345 aaPredicted RBP20.38■□□□□ 0.85
SSB-201ENST00000260956 KIF4BQ2VIQ3 1234 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 NBPF9Q3BBW0 867 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 SPTY2D1Q68D10 685 aaPredicted RBP20.38■□□□□ 0.85
SSB-201ENST00000260956 DLK2Q6UY11 383 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 LDHDQ86WU2 507 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 PLA2G4DQ86XP0 818 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 NOSTRINQ8IVI9 506 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 WDR66Q8TBY9 1149 aa20.38■□□□□ 0.85
SSB-201ENST00000260956 PPP4CP60510 307 aa20.37■□□□□ 0.85
SSB-201ENST00000260956 FMR1Q06787 632 aaKnown RBP eCLIP20.37■□□□□ 0.857e-13■□□□□ 8.1
SSB-201ENST00000260956 FOXP1Q9H334 677 aaPredicted RBP20.37■□□□□ 0.85
SSB-201ENST00000260956 SCAF8Q9UPN6 1271 aaKnown RBP20.37■□□□□ 0.85
SSB-201ENST00000260956 MORC2Q9Y6X9 1032 aaPredicted RBP20.37■□□□□ 0.85
SSB-201ENST00000260956 PRDM1O75626 825 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 OFD1O75665 1012 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 DDAH1O94760 285 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 PFKFB1P16118 471 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 C1QTNF8P60827 252 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 SHC4Q6S5L8 630 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 ZBED3Q96IU2 234 aaPredicted RBP20.36■□□□□ 0.85
SSB-201ENST00000260956 PGAP2Q9UHJ9 254 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 TTF2Q9UNY4 1162 aaKnown RBP20.36■□□□□ 0.85
SSB-201ENST00000260956 CLEC11AQ9Y240 323 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 RCSD1Q6JBY9 416 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 CHADLQ6NUI6 762 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 SARM1Q6SZW1 724 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 DIS3L2Q8IYB7 885 aaKnown RBP20.36■□□□□ 0.85
SSB-201ENST00000260956 TRIM22Q8IYM9 498 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 CMTR1Q8N1G2 835 aaKnown RBP20.36■□□□□ 0.85
SSB-201ENST00000260956 OGFOD1Q8N543 542 aa20.36■□□□□ 0.85
SSB-201ENST00000260956 CNTNAP5Q8WYK1 1306 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 BTBD18B2RXH4 712 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 WNT10BO00744 389 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 ITGBL1O95965 494 aaPredicted RBP20.35■□□□□ 0.85
SSB-201ENST00000260956 TRIM29Q14134 588 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 RESP18Q5W5W9 173 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 TMTC3Q6ZXV5 915 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 TBC1D22AQ8WUA7 517 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 KCNJ14Q9UNX9 436 aa20.35■□□□□ 0.85
SSB-201ENST00000260956 NT5C2P49902 561 aa20.34■□□□□ 0.85
SSB-201ENST00000260956 NPY5RQ15761 445 aa20.34■□□□□ 0.85
SSB-201ENST00000260956 C12orf60Q5U649 245 aa20.34■□□□□ 0.85
SSB-201ENST00000260956 DHX40Q8IX18 779 aaKnown RBP20.34■□□□□ 0.85
SSB-201ENST00000260956 PRMT6Q96LA8 375 aaPredicted RBP20.34■□□□□ 0.85
SSB-201ENST00000260956 TIGD1Q96MW7 591 aa20.34■□□□□ 0.85
SSB-201ENST00000260956 KCNF1Q9H3M0 494 aa20.34■□□□□ 0.85
SSB-201ENST00000260956 PRPF3O43395 683 aaKnown RBP20.33■□□□□ 0.85
SSB-201ENST00000260956 PLEKHA8P1O95397 391 aa20.33■□□□□ 0.85
SSB-201ENST00000260956 LDHBP07195 334 aaKnown RBP20.33■□□□□ 0.85
SSB-201ENST00000260956 ZNF75DP51815 510 aa20.33■□□□□ 0.85
SSB-201ENST00000260956 IFIT1BQ5T764 474 aaKnown RBP20.33■□□□□ 0.85
SSB-201ENST00000260956 DZIP1Q86YF9 867 aaKnown RBP20.33■□□□□ 0.85
SSB-201ENST00000260956 SMC1BQ8NDV3 1235 aa20.33■□□□□ 0.85
SSB-201ENST00000260956 RBM28Q9NW13 759 aaKnown RBP20.33■□□□□ 0.85
SSB-201ENST00000260956 A0A087WWV3 80 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 ZNF202O95125 648 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 MARCKSP29966 332 aaPredicted RBP20.33■□□□□ 0.84
SSB-201ENST00000260956 CFAP100Q494V2 611 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 IQCA1Q86XH1 822 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 OXER1Q8TDS5 423 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 SH3RF3Q8TEJ3 882 aaPredicted RBP20.33■□□□□ 0.84
SSB-201ENST00000260956 NUP133Q8WUM0 1156 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 ANKS1AQ92625 1134 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 TNFRSF25Q93038 417 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 ANO10Q9NW15 660 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 KIAA1468Q9P260 1216 aa20.33■□□□□ 0.84
SSB-201ENST00000260956 TRAF5O00463 557 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 NMT2O60551 498 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 CUTAO60888 179 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 PTMAP06454 111 aaKnown RBP20.32■□□□□ 0.84
SSB-201ENST00000260956 CALM1P0DP23 149 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 CALM2P0DP24 149 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 CALM3P0DP25 149 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 DIXDC1Q155Q3 683 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 ZC3H15Q8WU90 426 aaKnown RBP20.32■□□□□ 0.84
SSB-201ENST00000260956 PHF20Q9BVI0 1012 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 GLIS2Q9BZE0 524 aaPredicted RBP20.32■□□□□ 0.84
SSB-201ENST00000260956 GGA3Q9NZ52 723 aa20.32■□□□□ 0.84
SSB-201ENST00000260956 SPDYE2BA6NHP3 402 aa20.31■□□□□ 0.84
SSB-201ENST00000260956 SPDYE6P0CI01 402 aa20.31■□□□□ 0.84
SSB-201ENST00000260956 CDC25BP30305 580 aa20.31■□□□□ 0.84
SSB-201ENST00000260956 CRKP46108 304 aa20.31■□□□□ 0.84
SSB-201ENST00000260956 NR5A1Q13285 461 aa20.31■□□□□ 0.84
SSB-201ENST00000260956 ANGEL2Q5VTE6 544 aaKnown RBP20.31■□□□□ 0.84
SSB-201ENST00000260956 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.31■□□□□ 0.84
SSB-201ENST00000260956 CATIPQ7Z7H3 387 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms