RNA–Protein interactions for RNA: ENST00000259607.6

CCL21-201, Transcript of C-C motif chemokine ligand 21, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCL21, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21-201ENST00000259607 CPA4Q9UI42 421 aa12.19□□□□□ -0.46
CCL21-201ENST00000259607 CASP8AP2Q9UKL3 1982 aa12.19□□□□□ -0.46
CCL21-201ENST00000259607 PLIN4Q96Q06 1357 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 ADGRA2Q96PE1 1338 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 PTPRFP10586 1907 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 RANBP6O60518 1105 aaKnown RBP12.18□□□□□ -0.46
CCL21-201ENST00000259607 EEF2P13639 858 aaKnown RBP12.18□□□□□ -0.46
CCL21-201ENST00000259607 VCAM1P19320 739 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 CHMLP26374 656 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 PSMC4P43686 418 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 HERVK_113P62684 666 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 TFAP4Q01664 338 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 COG2Q14746 738 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 ZYXQ15942 572 aaKnown RBP12.18□□□□□ -0.46
CCL21-201ENST00000259607 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 CATSPERGQ6ZRH7 1159 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 OTOP1Q7RTM1 612 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 ZNF589Q86UQ0 364 aaPredicted RBP12.18□□□□□ -0.46
CCL21-201ENST00000259607 ACER1Q8TDN7 264 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 ESR2Q92731 530 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 TANGO6Q9C0B7 1094 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 R3HDMLQ9H3Y0 253 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 CWC22Q9HCG8 908 aaKnown RBP12.18□□□□□ -0.46
CCL21-201ENST00000259607 MORF4L1Q9UBU8 362 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 RABGAP1Q9Y3P9 1069 aa12.18□□□□□ -0.46
CCL21-201ENST00000259607 U3KPZ7 1027 aaPredicted RBP12.18□□□□□ -0.46
CCL21-201ENST00000259607 FGRP09769 529 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 TRDNQ13061 729 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 AKNAD1Q5T1N1 836 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 LBX2Q6XYB7 198 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 MKL1Q969V6 931 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 ABHD8Q96I13 439 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 KRT23Q9C075 422 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 RPAP3Q9H6T3 665 aaPredicted RBP12.17□□□□□ -0.46
CCL21-201ENST00000259607 MTMR4Q9NYA4 1195 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 PTPN22Q9Y2R2 807 aa12.17□□□□□ -0.46
CCL21-201ENST00000259607 TNPO2O14787 897 aaKnown RBP12.16□□□□□ -0.46
CCL21-201ENST00000259607 RAD21O60216 631 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 EIF5BO60841 1220 aaKnown RBP12.16□□□□□ -0.46
CCL21-201ENST00000259607 PRDM1O75626 825 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 FDX1P10109 184 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 MAPK4P31152 587 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 COPB2P35606 906 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 SHROOM1Q2M3G4 852 aaPredicted RBP12.16□□□□□ -0.46
CCL21-201ENST00000259607 IFFO2Q5TF58 517 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 IQCA1Q86XH1 822 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 GMCL1P1Q8NEA9 526 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 TTC14Q96N46 770 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 P2RX7Q99572 595 aaKnown RBP12.16□□□□□ -0.46
CCL21-201ENST00000259607 TCP11L1Q9NUJ3 509 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
CCL21-201ENST00000259607 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.16□□□□□ -0.46
CCL21-201ENST00000259607 CTDP1Q9Y5B0 961 aaPredicted RBP12.16□□□□□ -0.46
CCL21-201ENST00000259607 IGKV6D-41A0A0C4DH26 115 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 A0A1W2PRG0 241 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 FOXP2O15409 715 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 SGSM2O43147 1006 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 FLOT1O75955 427 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 EVX2Q03828 476 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 CTDSPL2Q05D32 466 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 RRP12Q5JTH9 1297 aaKnown RBP12.15□□□□□ -0.46
CCL21-201ENST00000259607 TRMT44Q8IYL2 757 aaKnown RBP12.15□□□□□ -0.46
CCL21-201ENST00000259607 RAET1EQ8TD07 263 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 CEP95Q96GE4 821 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 TRIM47Q96LD4 638 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 SRRDQ9UH36 339 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 STX8Q9UNK0 236 aa12.15□□□□□ -0.46
CCL21-201ENST00000259607 F5H6K3 240 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 CDC45O75419 566 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 CAPN2P17655 700 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 ERVK-9P63128 1117 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 ERVK-24P63145 666 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 KLRC3Q07444 240 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 SLC9C1Q4G0N8 1177 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 FAM47AQ5JRC9 791 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 RCSD1Q6JBY9 416 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 CHURC1Q8WUH1 139 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 FEM1BQ9UK73 627 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 PNMA2Q9UL42 364 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 HPS5Q9UPZ3 1129 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 IVNS1ABPQ9Y6Y0 642 aa12.14□□□□□ -0.47
CCL21-201ENST00000259607 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
CCL21-201ENST00000259607 HAND2P61296 217 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 IRF5Q13568 498 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 SART3Q15020 963 aaKnown RBP12.13□□□□□ -0.47
CCL21-201ENST00000259607 FAM160B2Q86V87 743 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 DGKHQ86XP1 1220 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 SIAH1Q8IUQ4 282 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 SPICE1Q8N0Z3 855 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 PRPF38AQ8NAV1 312 aaKnown RBP12.13□□□□□ -0.47
CCL21-201ENST00000259607 SLAIN1Q8ND83 568 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 GMCL1Q96IK5 515 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 UBAC1Q9BSL1 405 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 PAGR1Q9BTK6 254 aa12.13□□□□□ -0.47
CCL21-201ENST00000259607 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms