RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 ICA1Q05084 483 aa22.85■■□□□ 1.25
TM6SF1-201ENST00000258909 CACNB2Q08289 660 aaPredicted RBP22.85■■□□□ 1.25
TM6SF1-201ENST00000258909 MAP2K5Q13163 448 aa22.85■■□□□ 1.25
TM6SF1-201ENST00000258909 C16orf86Q6ZW13 317 aa22.85■■□□□ 1.25
TM6SF1-201ENST00000258909 STK11IPQ8N1F8 1099 aa22.85■■□□□ 1.25
TM6SF1-201ENST00000258909 KBTBD3Q8NAB2 608 aa22.85■■□□□ 1.25
TM6SF1-201ENST00000258909 STRBPQ96SI9 672 aaKnown RBP22.85■■□□□ 1.25
TM6SF1-201ENST00000258909 RLFQ13129 1914 aa22.84■■□□□ 1.25
TM6SF1-201ENST00000258909 ALPK3Q96L96 1907 aa22.84■■□□□ 1.25
TM6SF1-201ENST00000258909 ATP2B2Q01814 1243 aa22.84■■□□□ 1.25
TM6SF1-201ENST00000258909 COG2Q14746 738 aa22.84■■□□□ 1.25
TM6SF1-201ENST00000258909 OSBP2Q969R2 916 aa22.84■■□□□ 1.25
TM6SF1-201ENST00000258909 APBA2Q99767 749 aa22.84■■□□□ 1.25
TM6SF1-201ENST00000258909 ARHGEF10LQ9HCE6 1279 aa22.84■■□□□ 1.25
TM6SF1-201ENST00000258909 EVI5O60447 810 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 GLRX3O76003 335 aaKnown RBP22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 CAPN2P17655 700 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 PTPREP23469 700 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 CCND3P30281 292 aaPredicted RBP22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 SAMD1Q6SPF0 538 aaPredicted RBP22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 NECAB2Q7Z6G3 386 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 TRMT44Q8IYL2 757 aaKnown RBP22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 OTUD7AQ8TE49 926 aaPredicted RBP22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 CCDC17Q96LX7 622 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 HOXC10Q9NYD6 342 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 FLRT1Q9NZU1 646 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 TMX2Q9Y320 296 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 NR2E3Q9Y5X4 410 aa22.83■■□□□ 1.25
TM6SF1-201ENST00000258909 MNX1P50219 401 aaPredicted RBP22.82■■□□□ 1.24
TM6SF1-201ENST00000258909 FXR1P51114 621 aaKnown RBP eCLIP22.82■■□□□ 1.24
TM6SF1-201ENST00000258909 SLC15A5A6NIM6 579 aa22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 GSG1L2A8MUP6 293 aa22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 RNF113AO15541 343 aaKnown RBP22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 EEF2P13639 858 aaKnown RBP22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 RRP1P56182 461 aaKnown RBP22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 ANKLE1Q8NAG6 615 aa22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 MOV10L1Q9BXT6 1211 aaKnown RBP22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 VCPKMTQ9H867 229 aa22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 OGDHLQ9ULD0 1010 aa22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 IVNS1ABPQ9Y6Y0 642 aa22.81■■□□□ 1.24
TM6SF1-201ENST00000258909 MINDY4BA8MYZ0 360 aa22.8■■□□□ 1.24
TM6SF1-201ENST00000258909 FLOT1O75955 427 aa22.8■■□□□ 1.24
TM6SF1-201ENST00000258909 APPBP2Q92624 585 aa22.8■■□□□ 1.24
TM6SF1-201ENST00000258909 LPAR1Q92633 364 aa22.8■■□□□ 1.24
TM6SF1-201ENST00000258909 SH2D4AQ9H788 454 aa22.8■■□□□ 1.24
TM6SF1-201ENST00000258909 RBM27Q9P2N5 1060 aaKnown RBP22.8■■□□□ 1.24
TM6SF1-201ENST00000258909 ARPP21Q9UBL0 812 aaPredicted RBP22.8■■□□□ 1.24
TM6SF1-201ENST00000258909 M0R2C6 588 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 DSG3P32926 999 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 GRB14Q14449 540 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 PLS1Q14651 629 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 NPLOC4Q8TAT6 608 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 ATG4CQ96DT6 458 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 NBPF3Q9H094 633 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 SPATC1LQ9H0A9 340 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 GPAA1O43292 621 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 RAD21O60216 631 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 KANSL2Q9H9L4 492 aa22.79■■□□□ 1.24
TM6SF1-201ENST00000258909 A0A0G2JMZ2 1700 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 SZT2Q5T011 3432 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 PARP14Q460N5 1801 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 ERCC3P19447 782 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 SBK1Q52WX2 424 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 PI4K2BQ8TCG2 481 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 CRBNQ96SW2 442 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 C11orf49Q9H6J7 331 aa22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 EPB41L4AQ9HCS5 686 aaPredicted RBP22.78■■□□□ 1.24
TM6SF1-201ENST00000258909 WDR46O15213 610 aaKnown RBP22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 ZFYP08048 801 aaPredicted RBP22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 CYP2C19P33261 490 aa22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 MFSD14CQ5VZR4 134 aa22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 LHX8Q68G74 356 aa22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 SEC62Q99442 399 aaKnown RBP22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 FBXO28Q9NVF7 368 aa22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 TTC41PQ6P2S7 1318 aa22.77■■□□□ 1.24
TM6SF1-201ENST00000258909 APPP05067 770 aa22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 HOXC6P09630 235 aa22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 RASA1P20936 1047 aa22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 DPP9Q86TI2 863 aa22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 NCAPG2Q86XI2 1143 aa22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 C7orf61Q8IZ16 206 aa22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 YTHDC1Q96MU7 727 aaKnown RBP22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 MKNK2Q9HBH9 465 aa22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 COL11A1P12107 1806 aaPredicted RBP22.76■■□□□ 1.23
TM6SF1-201ENST00000258909 ERC2O15083 957 aa22.75■■□□□ 1.23
TM6SF1-201ENST00000258909 ADORA2AP29274 412 aa22.75■■□□□ 1.23
TM6SF1-201ENST00000258909 CNGA1P29973 690 aa22.75■■□□□ 1.23
TM6SF1-201ENST00000258909 TDO2P48775 406 aa22.75■■□□□ 1.23
TM6SF1-201ENST00000258909 GIMAP6Q6P9H5 292 aa22.75■■□□□ 1.23
TM6SF1-201ENST00000258909 GREB1LQ9C091 1923 aaPredicted RBP22.75■■□□□ 1.23
TM6SF1-201ENST00000258909 MB21D1Q8N884 522 aa22.74■■□□□ 1.23
TM6SF1-201ENST00000258909 FSD1Q9BTV5 496 aa22.74■■□□□ 1.23
TM6SF1-201ENST00000258909 PRO3102Q9H379 93 aa22.74■■□□□ 1.23
TM6SF1-201ENST00000258909 GOPCQ9HD26 462 aa22.74■■□□□ 1.23
TM6SF1-201ENST00000258909 PFASO15067 1338 aa22.74■■□□□ 1.23
TM6SF1-201ENST00000258909 DNAH12Q6ZR08 3092 aa22.74■■□□□ 1.23
TM6SF1-201ENST00000258909 FRMPD3Q5JV73 1810 aa22.74■■□□□ 1.23
TM6SF1-201ENST00000258909 PRDM1O75626 825 aa22.73■■□□□ 1.23
TM6SF1-201ENST00000258909 MX1P20591 662 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms