RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 GNRH1P01148 92 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 TSPY3P0CV98 308 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 TSPY8P0CW00 308 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 CHMLP26374 656 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 NEDD1Q8NHV4 660 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 LPAR1Q92633 364 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 CEP95Q96GE4 821 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 PAGR1Q9BTK6 254 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 MORF4L1Q9UBU8 362 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 SRRDQ9UH36 339 aa21.33■■□□□ 1.01
SNRPA1-201ENST00000254193 LOC285556D6RIA3 1793 aa21.33■■□□□ 1
SNRPA1-201ENST00000254193 ZMYM6O95789 1325 aa21.32■■□□□ 1
SNRPA1-201ENST00000254193 RAD21O60216 631 aa21.32■■□□□ 1
SNRPA1-201ENST00000254193 TANGO6Q9C0B7 1094 aa21.32■■□□□ 1
SNRPA1-201ENST00000254193 MTMR4Q9NYA4 1195 aa21.32■■□□□ 1
SNRPA1-201ENST00000254193 NYAP2Q9P242 653 aa21.32■■□□□ 1
SNRPA1-201ENST00000254193 CLIP2Q9UDT6 1046 aa21.32■■□□□ 1
SNRPA1-201ENST00000254193 TNPO2O14787 897 aaKnown RBP21.31■■□□□ 1
SNRPA1-201ENST00000254193 HOXD10P28358 340 aa21.31■■□□□ 1
SNRPA1-201ENST00000254193 GPRC5AQ8NFJ5 357 aa21.31■■□□□ 1
SNRPA1-201ENST00000254193 NBPF3Q9H094 633 aa21.31■■□□□ 1
SNRPA1-201ENST00000254193 GOPCQ9HD26 462 aa21.31■■□□□ 1
SNRPA1-201ENST00000254193 TOMM22Q9NS69 142 aa21.31■■□□□ 1
SNRPA1-201ENST00000254193 ORC4O43929 436 aa21.3■■□□□ 1
SNRPA1-201ENST00000254193 RANBP6O60518 1105 aaKnown RBP21.3■■□□□ 1
SNRPA1-201ENST00000254193 FGRP09769 529 aa21.3■■□□□ 1
SNRPA1-201ENST00000254193 PRKCZQ05513 592 aa21.3■■□□□ 1
SNRPA1-201ENST00000254193 Q3C1V9 767 aa21.3■■□□□ 1
SNRPA1-201ENST00000254193 RRP12Q5JTH9 1297 aaKnown RBP21.3■■□□□ 1
SNRPA1-201ENST00000254193 TBC1D10CQ8IV04 446 aa21.3■■□□□ 1
SNRPA1-201ENST00000254193 DSCC1Q9BVC3 393 aa21.3■■□□□ 1
SNRPA1-201ENST00000254193 MYPNQ86TC9 1320 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 TSPY2A6NKD2 308 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 SPDYE16A6NNV3 312 aaPredicted RBP21.29■■□□□ 1
SNRPA1-201ENST00000254193 CNMDO75829 334 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 PRMT2P55345 433 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 ERVK-9P63128 1117 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 ERVK-24P63145 666 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 COG2Q14746 738 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 GTF3C2Q8WUA4 911 aaPredicted RBP21.29■■□□□ 1
SNRPA1-201ENST00000254193 RUFY2Q8WXA3 655 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 GABRQQ9UN88 632 aa21.29■■□□□ 1
SNRPA1-201ENST00000254193 PLIN4Q96Q06 1357 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 F5H6K3 240 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 WDR46O15213 610 aaKnown RBP21.28■■□□□ 1
SNRPA1-201ENST00000254193 NMT2O60551 498 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 FLOT1O75955 427 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 TTLL1O95922 423 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 KLRC3Q07444 240 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 SAMD1Q6SPF0 538 aaPredicted RBP21.28■■□□□ 1
SNRPA1-201ENST00000254193 LRRC47Q8N1G4 583 aaKnown RBP21.28■■□□□ 1
SNRPA1-201ENST00000254193 MKL1Q969V6 931 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 NUP88Q99567 741 aaPredicted RBP21.28■■□□□ 1
SNRPA1-201ENST00000254193 IL17RBQ9NRM6 502 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 HOXC10Q9NYD6 342 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 BTBD7Q9P203 1132 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 RABGAP1Q9Y3P9 1069 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 RAD50Q92878 1312 aa21.28■■□□□ 1
SNRPA1-201ENST00000254193 ZNF213O14771 459 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 NDUFB10O96000 172 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 FLT3LGP49771 235 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 SLC9C1Q4G0N8 1177 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 FAM83BQ5T0W9 1011 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 AKNAD1Q5T1N1 836 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 LBX2Q6XYB7 198 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 MFSD6Q6ZSS7 791 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 RAET1EQ8TD07 263 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 COA7Q96BR5 231 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 PORCNQ9H237 461 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 FBXO28Q9NVF7 368 aa21.27■■□□□ 1
SNRPA1-201ENST00000254193 DSG3P32926 999 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 SOX10P56693 466 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 NKX2-3Q8TAU0 364 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 SH3TC2Q8TF17 1288 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 STAG1Q8WVM7 1258 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 ARMC5Q96C12 935 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 ATG4CQ96DT6 458 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 CTNNA3Q9UI47 895 aa21.26■□□□□ 0.99
SNRPA1-201ENST00000254193 ZSWIM8A7E2V4 1837 aa21.25■□□□□ 0.99
SNRPA1-201ENST00000254193 SGSM2O43147 1006 aa21.25■□□□□ 0.99
SNRPA1-201ENST00000254193 PTH1RQ03431 593 aa21.25■□□□□ 0.99
SNRPA1-201ENST00000254193 CCAR1Q8IX12 1150 aaKnown RBP21.25■□□□□ 0.99
SNRPA1-201ENST00000254193 RNF41Q9H4P4 317 aaPredicted RBP21.25■□□□□ 0.99
SNRPA1-201ENST00000254193 STX8Q9UNK0 236 aa21.25■□□□□ 0.99
SNRPA1-201ENST00000254193 MYCP01106 439 aaPredicted RBP21.24■□□□□ 0.99
SNRPA1-201ENST00000254193 IMMTQ16891 758 aaKnown RBP21.24■□□□□ 0.99
SNRPA1-201ENST00000254193 BMP2KLQ5H9B9 411 aa21.24■□□□□ 0.99
SNRPA1-201ENST00000254193 CHMP4CQ96CF2 233 aa21.24■□□□□ 0.99
SNRPA1-201ENST00000254193 GJD2Q9UKL4 321 aa21.24■□□□□ 0.99
SNRPA1-201ENST00000254193 NEDD4P46934 1319 aa21.24■□□□□ 0.99
SNRPA1-201ENST00000254193 PCP11498 1178 aaKnown RBP21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 MAPK4P31152 587 aa21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 CCNA1P78396 465 aa21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 SLFN13Q68D06 897 aa21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 NBPF11Q86T75 865 aa21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 GMCL1P1Q8NEA9 526 aa21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 ZNF333Q96JL9 665 aa21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 SYNPO2Q9UMS6 1093 aa21.23■□□□□ 0.99
SNRPA1-201ENST00000254193 GRK4P32298 578 aa21.22■□□□□ 0.99
SNRPA1-201ENST00000254193 PPP4R3BQ5MIZ7 849 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms