RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 LARP6Q9BRS8 491 aaKnown RBP15.09■□□□□ 0.01
LSM8-201ENST00000249299 SENP2Q9HC62 589 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 RBM27Q9P2N5 1060 aaKnown RBP15.09■□□□□ 0.01
LSM8-201ENST00000249299 SMC3Q9UQE7 1217 aa15.09■□□□□ 0.01
LSM8-201ENST00000249299 SNHG28P0DPA3 235 aa15.08■□□□□ 0
LSM8-201ENST00000249299 IFNAR1P17181 557 aa15.08■□□□□ 0
LSM8-201ENST00000249299 GUCY1A2P33402 732 aa15.08■□□□□ 0
LSM8-201ENST00000249299 SLC4A3P48751 1232 aa15.08■□□□□ 0
LSM8-201ENST00000249299 ICA1Q05084 483 aa15.08■□□□□ 0
LSM8-201ENST00000249299 ST3GAL1Q11201 340 aa15.08■□□□□ 0
LSM8-201ENST00000249299 MIGA2Q7L4E1 593 aa15.08■□□□□ 0
LSM8-201ENST00000249299 MICU3Q86XE3 530 aa15.08■□□□□ 0
LSM8-201ENST00000249299 NECAB1Q8N987 351 aa15.08■□□□□ 0
LSM8-201ENST00000249299 ZNF579Q8NAF0 562 aaKnown RBP15.08■□□□□ 0
LSM8-201ENST00000249299 GMCL1P1Q8NEA9 526 aa15.08■□□□□ 0
LSM8-201ENST00000249299 KLRG1Q96E93 195 aa15.08■□□□□ 0
LSM8-201ENST00000249299 ARHGEF10LQ9HCE6 1279 aa15.08■□□□□ 0
LSM8-201ENST00000249299 ZBTB21Q9ULJ3 1066 aa15.08■□□□□ 0
LSM8-201ENST00000249299 FAM196BA6NMK8 535 aa15.07■□□□□ 0
LSM8-201ENST00000249299 GABBR2O75899 941 aa15.07■□□□□ 0
LSM8-201ENST00000249299 PYGBP11216 843 aa15.07■□□□□ 0
LSM8-201ENST00000249299 SEPT2Q15019 361 aa15.07■□□□□ 0
LSM8-201ENST00000249299 MAP3K11Q16584 847 aa15.07■□□□□ 0
LSM8-201ENST00000249299 EAPPQ56P03 285 aaPredicted RBP15.07■□□□□ 0
LSM8-201ENST00000249299 CDAN1Q8IWY9 1227 aa15.07■□□□□ 0
LSM8-201ENST00000249299 NSUN7Q8NE18 718 aaKnown RBP15.07■□□□□ 0
LSM8-201ENST00000249299 FAM217BQ9NTX9 383 aaPredicted RBP15.07■□□□□ 0
LSM8-201ENST00000249299 CLIP2Q9UDT6 1046 aa15.07■□□□□ 0
LSM8-201ENST00000249299 NAP1L2Q9ULW6 460 aaPredicted RBP15.07■□□□□ 0
LSM8-201ENST00000249299 TMX2Q9Y320 296 aa15.07■□□□□ 0
LSM8-201ENST00000249299 GREB1LQ9C091 1923 aaPredicted RBP15.07■□□□□ 0
LSM8-201ENST00000249299 STK36Q9NRP7 1315 aa15.07■□□□□ 0
LSM8-201ENST00000249299 EEF2P13639 858 aaKnown RBP15.06■□□□□ 0
LSM8-201ENST00000249299 FKBP1BP68106 108 aa15.06■□□□□ 0
LSM8-201ENST00000249299 CCT2P78371 535 aaKnown RBP15.06■□□□□ 0
LSM8-201ENST00000249299 NUCB2P80303 420 aa15.06■□□□□ 0
LSM8-201ENST00000249299 STK3Q13188 491 aa15.06■□□□□ 0
LSM8-201ENST00000249299 RRP1BQ14684 758 aaKnown RBP15.06■□□□□ 0
LSM8-201ENST00000249299 GRM4Q14833 912 aa15.06■□□□□ 0
LSM8-201ENST00000249299 NTRK3Q16288 839 aa15.06■□□□□ 0
LSM8-201ENST00000249299 ASPRV1Q53RT3 343 aa15.06■□□□□ 0
LSM8-201ENST00000249299 GPATCH4Q5T3I0 446 aaKnown RBP15.06■□□□□ 0
LSM8-201ENST00000249299 SIAH1Q8IUQ4 282 aa15.06■□□□□ 0
LSM8-201ENST00000249299 SCYL3Q8IZE3 742 aa15.06■□□□□ 0
LSM8-201ENST00000249299 FAM177A1Q8N128 213 aaPredicted RBP15.06■□□□□ 0
LSM8-201ENST00000249299 WASF1Q92558 559 aa15.06■□□□□ 0
LSM8-201ENST00000249299 WDR18Q9BV38 432 aa15.06■□□□□ 0
LSM8-201ENST00000249299 RNF26Q9BY78 433 aaPredicted RBP15.06■□□□□ 0
LSM8-201ENST00000249299 RRAGCQ9HB90 399 aa15.06■□□□□ 0
LSM8-201ENST00000249299 CHMP5Q9NZZ3 219 aa15.06■□□□□ 0
LSM8-201ENST00000249299 PALM3A6NDB9 673 aaPredicted RBP15.05■□□□□ -0
LSM8-201ENST00000249299 USP17L5A8MUK1 530 aa15.05■□□□□ -0
LSM8-201ENST00000249299 GDF11O95390 407 aa15.05■□□□□ -0
LSM8-201ENST00000249299 CDC27P30260 824 aa15.05■□□□□ -0
LSM8-201ENST00000249299 ADD1P35611 737 aaKnown RBP15.05■□□□□ -0
LSM8-201ENST00000249299 MAP3K9P80192 1104 aa15.05■□□□□ -0
LSM8-201ENST00000249299 TRIM22Q8IYM9 498 aa15.05■□□□□ -0
LSM8-201ENST00000249299 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.05■□□□□ -0
LSM8-201ENST00000249299 NUP133Q8WUM0 1156 aa15.05■□□□□ -0
LSM8-201ENST00000249299 DCAF4Q8WV16 495 aa15.05■□□□□ -0
LSM8-201ENST00000249299 CDCA5Q96FF9 252 aa15.05■□□□□ -0
LSM8-201ENST00000249299 GMCL1Q96IK5 515 aa15.05■□□□□ -0
LSM8-201ENST00000249299 PICK1Q9NRD5 415 aa15.05■□□□□ -0
LSM8-201ENST00000249299 USP2O75604 605 aaPredicted RBP15.04■□□□□ -0
LSM8-201ENST00000249299 CTDNEP1O95476 244 aa15.04■□□□□ -0
LSM8-201ENST00000249299 PARP1P09874 1014 aaKnown RBP15.04■□□□□ -0
LSM8-201ENST00000249299 PDHBP11177 359 aa15.04■□□□□ -0
LSM8-201ENST00000249299 IREB2P48200 963 aaKnown RBP15.04■□□□□ -0
LSM8-201ENST00000249299 RAB3GAP1Q15042 981 aa15.04■□□□□ -0
LSM8-201ENST00000249299 TMTC3Q6ZXV5 915 aa15.04■□□□□ -0
LSM8-201ENST00000249299 WRNIP1Q96S55 665 aa15.04■□□□□ -0
LSM8-201ENST00000249299 KIAA1683Q9H0B3 1180 aa15.04■□□□□ -0
LSM8-201ENST00000249299 AS3MTQ9HBK9 375 aa15.04■□□□□ -0
LSM8-201ENST00000249299 NCOA5Q9HCD5 579 aaKnown RBP15.04■□□□□ -0
LSM8-201ENST00000249299 GOPCQ9HD26 462 aa15.04■□□□□ -0
LSM8-201ENST00000249299 SSC5DA1L4H1 1573 aa15.03■□□□□ -0
LSM8-201ENST00000249299 PTPDC1A2A3K4 754 aa15.03■□□□□ -0
LSM8-201ENST00000249299 ADM5C9JUS6 153 aa15.03■□□□□ -0
LSM8-201ENST00000249299 FMNL1O95466 1100 aaPredicted RBP15.03■□□□□ -0
LSM8-201ENST00000249299 SLURP2P0DP57 97 aa15.03■□□□□ -0
LSM8-201ENST00000249299 CHRM1P11229 460 aaPredicted RBP15.03■□□□□ -0
LSM8-201ENST00000249299 GJB2P29033 226 aa15.03■□□□□ -0
LSM8-201ENST00000249299 JAG1P78504 1218 aa15.03■□□□□ -0
LSM8-201ENST00000249299 SSRP1Q08945 709 aaKnown RBP15.03■□□□□ -0
LSM8-201ENST00000249299 FUT2Q10981 343 aa15.03■□□□□ -0
LSM8-201ENST00000249299 ARMC9Q7Z3E5 817 aa15.03■□□□□ -0
LSM8-201ENST00000249299 FAM184AQ8NB25 1140 aa15.03■□□□□ -0
LSM8-201ENST00000249299 LPAR1Q92633 364 aa15.03■□□□□ -0
LSM8-201ENST00000249299 KIF12Q96FN5 646 aa15.03■□□□□ -0
LSM8-201ENST00000249299 MYL10Q9BUA6 226 aa15.03■□□□□ -0
LSM8-201ENST00000249299 SPZ1Q9BXG8 430 aa15.03■□□□□ -0
LSM8-201ENST00000249299 MAD2L2Q9UI95 211 aa15.03■□□□□ -0
LSM8-201ENST00000249299 F5H6K3 240 aa15.02■□□□□ -0
LSM8-201ENST00000249299 PRPF3O43395 683 aaKnown RBP15.02■□□□□ -0
LSM8-201ENST00000249299 PLA2G6O60733 806 aa15.02■□□□□ -0
LSM8-201ENST00000249299 USP14P54578 494 aa15.02■□□□□ -0
LSM8-201ENST00000249299 KLRC3Q07444 240 aa15.02■□□□□ -0
LSM8-201ENST00000249299 ZNF543Q08ER8 600 aa15.02■□□□□ -0
LSM8-201ENST00000249299 NBPF11Q86T75 865 aa15.02■□□□□ -0
LSM8-201ENST00000249299 ANKRD13AQ8IZ07 590 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms