RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 IGKV6D-41A0A0C4DH26 115 aa28.89■■■□□ 2.22
SDF2L1-201ENST00000248958 PCP11498 1178 aaKnown RBP28.89■■■□□ 2.22
SDF2L1-201ENST00000248958 ATP2B2Q01814 1243 aa28.89■■■□□ 2.22
SDF2L1-201ENST00000248958 CTDSPL2Q05D32 466 aa28.89■■■□□ 2.22
SDF2L1-201ENST00000248958 DSCC1Q9BVC3 393 aa28.89■■■□□ 2.22
SDF2L1-201ENST00000248958 SYNPO2Q9UMS6 1093 aa28.89■■■□□ 2.22
SDF2L1-201ENST00000248958 MYH4Q9Y623 1939 aa28.88■■■□□ 2.21
SDF2L1-201ENST00000248958 WDR46O15213 610 aaKnown RBP28.88■■■□□ 2.21
SDF2L1-201ENST00000248958 FGRP09769 529 aa28.88■■■□□ 2.21
SDF2L1-201ENST00000248958 TFAP4Q01664 338 aa28.88■■■□□ 2.21
SDF2L1-201ENST00000248958 ERICH6BQ5W0A0 696 aa28.88■■■□□ 2.21
SDF2L1-201ENST00000248958 TRIM47Q96LD4 638 aa28.88■■■□□ 2.21
SDF2L1-201ENST00000248958 CCDC85CA6NKD9 419 aa28.87■■■□□ 2.21
SDF2L1-201ENST00000248958 ORC4O43929 436 aa28.87■■■□□ 2.21
SDF2L1-201ENST00000248958 CTGFP29279 349 aa28.87■■■□□ 2.21
SDF2L1-201ENST00000248958 LBX2Q6XYB7 198 aa28.87■■■□□ 2.21
SDF2L1-201ENST00000248958 HOXC10Q9NYD6 342 aa28.87■■■□□ 2.21
SDF2L1-201ENST00000248958 SRRDQ9UH36 339 aa28.87■■■□□ 2.21
SDF2L1-201ENST00000248958 LAMA4Q16363 1823 aa28.86■■■□□ 2.21
SDF2L1-201ENST00000248958 TSPY2A6NKD2 308 aa28.86■■■□□ 2.21
SDF2L1-201ENST00000248958 CHMLP26374 656 aa28.86■■■□□ 2.21
SDF2L1-201ENST00000248958 GPRC5AQ8NFJ5 357 aa28.86■■■□□ 2.21
SDF2L1-201ENST00000248958 MKL1Q969V6 931 aa28.86■■■□□ 2.21
SDF2L1-201ENST00000248958 MTMR4Q9NYA4 1195 aa28.86■■■□□ 2.21
SDF2L1-201ENST00000248958 CTNNA3Q9UI47 895 aa28.86■■■□□ 2.21
SDF2L1-201ENST00000248958 ZNF213O14771 459 aa28.85■■■□□ 2.21
SDF2L1-201ENST00000248958 TTLL1O95922 423 aa28.85■■■□□ 2.21
SDF2L1-201ENST00000248958 NT5C2P49902 561 aa28.85■■■□□ 2.21
SDF2L1-201ENST00000248958 COG2Q14746 738 aa28.85■■■□□ 2.21
SDF2L1-201ENST00000248958 CEP95Q96GE4 821 aa28.85■■■□□ 2.21
SDF2L1-201ENST00000248958 RNF41Q9H4P4 317 aaPredicted RBP28.85■■■□□ 2.21
SDF2L1-201ENST00000248958 RABGAP1Q9Y3P9 1069 aa28.85■■■□□ 2.21
SDF2L1-201ENST00000248958 TNPO2O14787 897 aaKnown RBP28.84■■■□□ 2.21
SDF2L1-201ENST00000248958 FAM47AQ5JRC9 791 aa28.84■■■□□ 2.21
SDF2L1-201ENST00000248958 COA7Q96BR5 231 aa28.84■■■□□ 2.21
SDF2L1-201ENST00000248958 TANGO6Q9C0B7 1094 aa28.84■■■□□ 2.21
SDF2L1-201ENST00000248958 RBPJLQ9UBG7 517 aa28.84■■■□□ 2.21
SDF2L1-201ENST00000248958 CLIP2Q9UDT6 1046 aa28.84■■■□□ 2.21
SDF2L1-201ENST00000248958 MYPNQ86TC9 1320 aa28.84■■■□□ 2.21
SDF2L1-201ENST00000248958 ECM2O94769 699 aaPredicted RBP28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 ERVK-9P63128 1117 aa28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 ERVK-24P63145 666 aa28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 KIAA1755Q5JYT7 1200 aa28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 AKNAD1Q5T1N1 836 aa28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 MFSD6Q6ZSS7 791 aa28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 STAG1Q8WVM7 1258 aa28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 PTCH2Q9Y6C5 1203 aa28.83■■■□□ 2.21
SDF2L1-201ENST00000248958 RANBP6O60518 1105 aaKnown RBP28.82■■■□□ 2.2
SDF2L1-201ENST00000248958 NBPF11Q86T75 865 aa28.82■■■□□ 2.2
SDF2L1-201ENST00000248958 SPICE1Q8N0Z3 855 aa28.82■■■□□ 2.2
SDF2L1-201ENST00000248958 TXNRD2Q9NNW7 524 aa28.82■■■□□ 2.2
SDF2L1-201ENST00000248958 TOMM22Q9NS69 142 aa28.82■■■□□ 2.2
SDF2L1-201ENST00000248958 RLFQ13129 1914 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 PARP14Q460N5 1801 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 SPDYE16A6NNV3 312 aaPredicted RBP28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 HAND2P61296 217 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 CCNA1P78396 465 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 IMMTQ16891 758 aaKnown RBP28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 BMP2KLQ5H9B9 411 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 RAET1EQ8TD07 263 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 PAGR1Q9BTK6 254 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 INCENPQ9NQS7 918 aa28.81■■■□□ 2.2
SDF2L1-201ENST00000248958 F5H6K3 240 aa28.8■■■□□ 2.2
SDF2L1-201ENST00000248958 RAD21O60216 631 aa28.8■■■□□ 2.2
SDF2L1-201ENST00000248958 DSG3P32926 999 aa28.8■■■□□ 2.2
SDF2L1-201ENST00000248958 KLRC3Q07444 240 aa28.8■■■□□ 2.2
SDF2L1-201ENST00000248958 MB21D1Q8N884 522 aa28.8■■■□□ 2.2
SDF2L1-201ENST00000248958 TACC3Q9Y6A5 838 aa28.8■■■□□ 2.2
SDF2L1-201ENST00000248958 FLOT1O75955 427 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 MAPK4P31152 587 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 PRKCZQ05513 592 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 SLC9C1Q4G0N8 1177 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 CCAR1Q8IX12 1150 aaKnown RBP28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 GMCL1P1Q8NEA9 526 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 ARMC5Q96C12 935 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 IL25Q9H293 177 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 TCP11L1Q9NUJ3 509 aa28.79■■■□□ 2.2
SDF2L1-201ENST00000248958 A0A0G2JMZ2 1700 aa28.78■■■□□ 2.2
SDF2L1-201ENST00000248958 SGSM2O43147 1006 aa28.78■■■□□ 2.2
SDF2L1-201ENST00000248958 Q3C1V9 767 aa28.78■■■□□ 2.2
SDF2L1-201ENST00000248958 RRP12Q5JTH9 1297 aaKnown RBP28.78■■■□□ 2.2
SDF2L1-201ENST00000248958 DOCK3Q8IZD9 2030 aa28.77■■■□□ 2.2
SDF2L1-201ENST00000248958 CNMDO75829 334 aa28.77■■■□□ 2.2
SDF2L1-201ENST00000248958 IRF5Q13568 498 aa28.77■■■□□ 2.2
SDF2L1-201ENST00000248958 POTEEQ6S8J3 1075 aa28.77■■■□□ 2.2
SDF2L1-201ENST00000248958 TBC1D10CQ8IV04 446 aa28.77■■■□□ 2.2
SDF2L1-201ENST00000248958 NBPF3Q9H094 633 aa28.77■■■□□ 2.2
SDF2L1-201ENST00000248958 IL17RBQ9NRM6 502 aa28.77■■■□□ 2.2
SDF2L1-201ENST00000248958 NDUFB10O96000 172 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 NOVP48745 357 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 FLT3LGP49771 235 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 FAM83BQ5T0W9 1011 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 ESR2Q92731 530 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 PPP4R2Q9NY27 417 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 GABRQQ9UN88 632 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 STX8Q9UNK0 236 aa28.76■■■□□ 2.19
SDF2L1-201ENST00000248958 GRK4P32298 578 aa28.74■■■□□ 2.19
SDF2L1-201ENST00000248958 LRRC47Q8N1G4 583 aaKnown RBP28.74■■■□□ 2.19
SDF2L1-201ENST00000248958 SLAIN1Q8ND83 568 aa28.74■■■□□ 2.19
SDF2L1-201ENST00000248958 PXYLP1Q8TE99 480 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms