RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ARMC5Q96C12 935 aa15.19■□□□□ 0.02
VPREB3-201ENST00000248948 RPAP3Q9H6T3 665 aaPredicted RBP15.19■□□□□ 0.02
VPREB3-201ENST00000248948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.19■□□□□ 0.02
VPREB3-201ENST00000248948 PTCH2Q9Y6C5 1203 aa15.19■□□□□ 0.02
VPREB3-201ENST00000248948 TNPO2O14787 897 aaKnown RBP15.18■□□□□ 0.02
VPREB3-201ENST00000248948 WDR46O15213 610 aaKnown RBP15.18■□□□□ 0.02
VPREB3-201ENST00000248948 PCP11498 1178 aaKnown RBP15.18■□□□□ 0.02
VPREB3-201ENST00000248948 EEF2P13639 858 aaKnown RBP15.18■□□□□ 0.02
VPREB3-201ENST00000248948 PPP4R3BQ5MIZ7 849 aa15.18■□□□□ 0.02
VPREB3-201ENST00000248948 SIAH1Q8IUQ4 282 aa15.18■□□□□ 0.02
VPREB3-201ENST00000248948 ZNF444Q8N0Y2 327 aaPredicted RBP15.18■□□□□ 0.02
VPREB3-201ENST00000248948 P2RX7Q99572 595 aaKnown RBP15.18■□□□□ 0.02
VPREB3-201ENST00000248948 GOPCQ9HD26 462 aa15.18■□□□□ 0.02
VPREB3-201ENST00000248948 NYAP2Q9P242 653 aa15.18■□□□□ 0.02
VPREB3-201ENST00000248948 ORC4O43929 436 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 PRDM1O75626 825 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 TSPY3P0CV98 308 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 TSPY8P0CW00 308 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 NT5C2P49902 561 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 SLC9C1Q4G0N8 1177 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 CWC27Q6UX04 472 aaKnown RBP15.17■□□□□ 0.02
VPREB3-201ENST00000248948 GPRC5AQ8NFJ5 357 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 NEDD1Q8NHV4 660 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 TANGO6Q9C0B7 1094 aa15.17■□□□□ 0.02
VPREB3-201ENST00000248948 SPDYE16A6NNV3 312 aaPredicted RBP15.16■□□□□ 0.02
VPREB3-201ENST00000248948 FGAP02671 866 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 NEFLP07196 543 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 FGRP09769 529 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 ERVK-9P63128 1117 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 ERVK-24P63145 666 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 PRKCZQ05513 592 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 IRF5Q13568 498 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 STK11IPQ8N1F8 1099 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 COA7Q96BR5 231 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 DSCC1Q9BVC3 393 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 TXNRD2Q9NNW7 524 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 RABGAP1Q9Y3P9 1069 aa15.16■□□□□ 0.02
VPREB3-201ENST00000248948 BRCA2P51587 3418 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 TTLL1O95922 423 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 ATP2B2Q01814 1243 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 NBPF11Q86T75 865 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 MB21D1Q8N884 522 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 SLAIN1Q8ND83 568 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 RAET1EQ8TD07 263 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 SOCS4Q8WXH5 440 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 CEP95Q96GE4 821 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 ZNF333Q96JL9 665 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 MTMR4Q9NYA4 1195 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 RBPJLQ9UBG7 517 aa15.15■□□□□ 0.02
VPREB3-201ENST00000248948 TSPY2A6NKD2 308 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 MAPK4P31152 587 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 CCNA1P78396 465 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 CTDSPL2Q05D32 466 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 COG2Q14746 738 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 KIAA1755Q5JYT7 1200 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 SPICE1Q8N0Z3 855 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 GMCL1P1Q8NEA9 526 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 STAG1Q8WVM7 1258 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 RUFY2Q8WXA3 655 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 MKL1Q969V6 931 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 PAGR1Q9BTK6 254 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 RNF41Q9H4P4 317 aaPredicted RBP15.14■□□□□ 0.01
VPREB3-201ENST00000248948 FRMPD3Q5JV73 1810 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 PLXNA1Q9UIW2 1896 aa15.14■□□□□ 0.01
VPREB3-201ENST00000248948 CNMDO75829 334 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 FLOT1O75955 427 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 FLT3LGP49771 235 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 RGS19P49795 217 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 TFAP4Q01664 338 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 POTEEQ6S8J3 1075 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 PXYLP1Q8TE99 480 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 HOXC10Q9NYD6 342 aa15.13■□□□□ 0.01
VPREB3-201ENST00000248948 KIAA0100Q14667 2235 aaKnown RBP15.13■□□□□ 0.01
VPREB3-201ENST00000248948 ECM2O94769 699 aaPredicted RBP15.12■□□□□ 0.01
VPREB3-201ENST00000248948 NDUFB10O96000 172 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 CENPBP07199 599 aaPredicted RBP15.12■□□□□ 0.01
VPREB3-201ENST00000248948 CHMLP26374 656 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 GRK4P32298 578 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 DSG3P32926 999 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 FAM47AQ5JRC9 791 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 AKNAD1Q5T1N1 836 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 TBC1D10CQ8IV04 446 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 CCDC136Q96JN2 1154 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 NBPF3Q9H094 633 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 CTNNA3Q9UI47 895 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 GABRQQ9UN88 632 aa15.12■□□□□ 0.01
VPREB3-201ENST00000248948 F5H6K3 240 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 ZNF213O14771 459 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 NOVP48745 357 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 SOX10P56693 466 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 HAND2P61296 217 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 KLRC3Q07444 240 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 IMMTQ16891 758 aaKnown RBP15.11■□□□□ 0.01
VPREB3-201ENST00000248948 BMP2KLQ5H9B9 411 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 FAM83BQ5T0W9 1011 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 LRRC47Q8N1G4 583 aaKnown RBP15.11■□□□□ 0.01
VPREB3-201ENST00000248948 SH3TC2Q8TF17 1288 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 IL25Q9H293 177 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 BTBD7Q9P203 1132 aa15.11■□□□□ 0.01
VPREB3-201ENST00000248948 CLIP2Q9UDT6 1046 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms