RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 TICAM2Q86XR7 235 aa19.41■□□□□ 0.7
CLPP-201ENST00000245816 KBTBD3Q8NAB2 608 aa19.41■□□□□ 0.7
CLPP-201ENST00000245816 PI4K2BQ8TCG2 481 aa19.41■□□□□ 0.7
CLPP-201ENST00000245816 STAP2Q9UGK3 403 aa19.41■□□□□ 0.7
CLPP-201ENST00000245816 RABGAP1Q9Y3P9 1069 aa19.41■□□□□ 0.7
CLPP-201ENST00000245816 TRIOBPQ9H2D6 2365 aa19.4■□□□□ 0.7
CLPP-201ENST00000245816 MPHOSPH10O00566 681 aaKnown RBP19.4■□□□□ 0.7
CLPP-201ENST00000245816 FARP2O94887 1054 aaPredicted RBP19.4■□□□□ 0.7
CLPP-201ENST00000245816 MX1P20591 662 aa19.4■□□□□ 0.7
CLPP-201ENST00000245816 USP14P54578 494 aa19.4■□□□□ 0.7
CLPP-201ENST00000245816 PLEKHH3Q7Z736 793 aa19.4■□□□□ 0.7
CLPP-201ENST00000245816 EPB41L4AQ9HCS5 686 aaPredicted RBP19.4■□□□□ 0.7
CLPP-201ENST00000245816 PCDH10Q9P2E7 1040 aa19.4■□□□□ 0.7
CLPP-201ENST00000245816 M0R2C6 588 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 TFRCP02786 760 aaKnown RBP19.39■□□□□ 0.69
CLPP-201ENST00000245816 XRCC5P13010 732 aaKnown RBP19.39■□□□□ 0.69
CLPP-201ENST00000245816 MAPK4P31152 587 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 CACNB2Q08289 660 aaPredicted RBP19.39■□□□□ 0.69
CLPP-201ENST00000245816 PAWRQ96IZ0 340 aaKnown RBP19.39■□□□□ 0.69
CLPP-201ENST00000245816 SEC62Q99442 399 aaKnown RBP19.39■□□□□ 0.69
CLPP-201ENST00000245816 NUDT12Q9BQG2 462 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 PRO3102Q9H379 93 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 SWAP70Q9UH65 585 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 TMX2Q9Y320 296 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 RPTORQ8N122 1335 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 A0A0G2JMZ2 1700 aa19.39■□□□□ 0.69
CLPP-201ENST00000245816 CCND3P30281 292 aaPredicted RBP19.38■□□□□ 0.69
CLPP-201ENST00000245816 TMEM179Q6ZVK1 233 aa19.38■□□□□ 0.69
CLPP-201ENST00000245816 NPLOC4Q8TAT6 608 aa19.38■□□□□ 0.69
CLPP-201ENST00000245816 GREB1LQ9C091 1923 aaPredicted RBP19.38■□□□□ 0.69
CLPP-201ENST00000245816 PARP14Q460N5 1801 aa19.37■□□□□ 0.69
CLPP-201ENST00000245816 RNF113AO15541 343 aaKnown RBP19.37■□□□□ 0.69
CLPP-201ENST00000245816 IGHDP01880 384 aa19.37■□□□□ 0.69
CLPP-201ENST00000245816 PRKAR2AP13861 404 aaKnown RBP19.37■□□□□ 0.69
CLPP-201ENST00000245816 PTPREP23469 700 aa19.37■□□□□ 0.69
CLPP-201ENST00000245816 LHX8Q68G74 356 aa19.37■□□□□ 0.69
CLPP-201ENST00000245816 SPICE1Q8N0Z3 855 aa19.37■□□□□ 0.69
CLPP-201ENST00000245816 DPF3Q92784 378 aa19.37■□□□□ 0.69
CLPP-201ENST00000245816 MYH8P13535 1937 aa19.37■□□□□ 0.69
CLPP-201ENST00000245816 FOXP2O15409 715 aa19.36■□□□□ 0.69
CLPP-201ENST00000245816 EEF2P13639 858 aaKnown RBP19.36■□□□□ 0.69
CLPP-201ENST00000245816 FXR1P51114 621 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLPP-201ENST00000245816 NUCB1Q02818 461 aa19.36■□□□□ 0.69
CLPP-201ENST00000245816 MAP2K5Q13163 448 aa19.36■□□□□ 0.69
CLPP-201ENST00000245816 SBK1Q52WX2 424 aa19.36■□□□□ 0.69
CLPP-201ENST00000245816 STK11IPQ8N1F8 1099 aa19.36■□□□□ 0.69
CLPP-201ENST00000245816 GTF3C2Q8WUA4 911 aaPredicted RBP19.36■□□□□ 0.69
CLPP-201ENST00000245816 MOV10L1Q9BXT6 1211 aaKnown RBP19.36■□□□□ 0.69
CLPP-201ENST00000245816 HMX1Q9NP08 348 aaPredicted RBP19.36■□□□□ 0.69
CLPP-201ENST00000245816 OGDHLQ9ULD0 1010 aa19.36■□□□□ 0.69
CLPP-201ENST00000245816 RASA1P20936 1047 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 DSG3P32926 999 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 PDE1AP54750 535 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 COG2Q14746 738 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 CHD1LQ86WJ1 897 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 TRPV1Q8NER1 839 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 SOCS4Q8WXH5 440 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 APPBP2Q92624 585 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 ATG4CQ96DT6 458 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 VCPKMTQ9H867 229 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 FBXO28Q9NVF7 368 aa19.35■□□□□ 0.69
CLPP-201ENST00000245816 GPAA1O43292 621 aa19.34■□□□□ 0.69
CLPP-201ENST00000245816 RGS2P41220 211 aa19.34■□□□□ 0.69
CLPP-201ENST00000245816 ICA1Q05084 483 aa19.34■□□□□ 0.69
CLPP-201ENST00000245816 GRB14Q14449 540 aa19.34■□□□□ 0.69
CLPP-201ENST00000245816 CHRDL2Q6WN34 429 aa19.34■□□□□ 0.69
CLPP-201ENST00000245816 OSBPL3Q9H4L5 887 aa19.34■□□□□ 0.69
CLPP-201ENST00000245816 RBM27Q9P2N5 1060 aaKnown RBP19.34■□□□□ 0.69
CLPP-201ENST00000245816 TACC3Q9Y6A5 838 aa19.34■□□□□ 0.69
CLPP-201ENST00000245816 LAMA3Q16787 3333 aa19.33■□□□□ 0.69
CLPP-201ENST00000245816 PFASO15067 1338 aa19.33■□□□□ 0.69
CLPP-201ENST00000245816 SLC15A5A6NIM6 579 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 COBLO75128 1261 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 HOXC6P09630 235 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 GIMAP6Q6P9H5 292 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 DDRGK1Q96HY6 314 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 CCDC17Q96LX7 622 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 APBA2Q99767 749 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 ADAMTS5Q9UNA0 930 aa19.33■□□□□ 0.68
CLPP-201ENST00000245816 ROBO3Q96MS0 1386 aa19.32■□□□□ 0.68
CLPP-201ENST00000245816 IGKV6D-41A0A0C4DH26 115 aa19.32■□□□□ 0.68
CLPP-201ENST00000245816 ZKSCAN1P17029 563 aaPredicted RBP19.32■□□□□ 0.68
CLPP-201ENST00000245816 TMEM132BQ14DG7 1078 aa19.32■□□□□ 0.68
CLPP-201ENST00000245816 EVI5LQ96CN4 794 aa19.32■□□□□ 0.68
CLPP-201ENST00000245816 TANGO6Q9C0B7 1094 aa19.32■□□□□ 0.68
CLPP-201ENST00000245816 LNPKQ9C0E8 428 aa19.32■□□□□ 0.68
CLPP-201ENST00000245816 SPATC1LQ9H0A9 340 aa19.32■□□□□ 0.68
CLPP-201ENST00000245816 COL6A1P12109 1028 aa19.31■□□□□ 0.68
CLPP-201ENST00000245816 GNAT2P19087 354 aa19.31■□□□□ 0.68
CLPP-201ENST00000245816 ERCC3P19447 782 aa19.31■□□□□ 0.68
CLPP-201ENST00000245816 CYP2C19P33261 490 aa19.31■□□□□ 0.68
CLPP-201ENST00000245816 REPS2Q8NFH8 660 aa19.31■□□□□ 0.68
CLPP-201ENST00000245816 HTATIP2Q9BUP3 242 aa19.31■□□□□ 0.68
CLPP-201ENST00000245816 HOXC10Q9NYD6 342 aa19.31■□□□□ 0.68
CLPP-201ENST00000245816 ARPP21Q9UBL0 812 aaPredicted RBP19.31■□□□□ 0.68
CLPP-201ENST00000245816 COL11A1P12107 1806 aaPredicted RBP19.3■□□□□ 0.68
CLPP-201ENST00000245816 MINDY4BA8MYZ0 360 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 PRDM1O75626 825 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 ZMYM1Q5SVZ6 1142 aa19.3■□□□□ 0.68
CLPP-201ENST00000245816 WDR78Q5VTH9 848 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms