RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PICALMQ13492 652 aa21.23■□□□□ 0.99
HOXC11-201ENST00000243082 CEP131Q9UPN4 1083 aa21.23■□□□□ 0.99
HOXC11-201ENST00000243082 MORC2Q9Y6X9 1032 aaPredicted RBP21.23■□□□□ 0.99
HOXC11-201ENST00000243082 SLX4Q8IY92 1834 aa21.23■□□□□ 0.99
HOXC11-201ENST00000243082 GNAQP50148 359 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 GABPAQ06546 454 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 NOM1Q5C9Z4 860 aaKnown RBP21.22■□□□□ 0.99
HOXC11-201ENST00000243082 HHIPL2Q6UWX4 724 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 USP40Q9NVE5 1235 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 STK32BQ9NY57 414 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 KCNH3Q9ULD8 1083 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 SRPRBQ9Y5M8 271 aaKnown RBP21.22■□□□□ 0.99
HOXC11-201ENST00000243082 PALM3A6NDB9 673 aaPredicted RBP21.22■□□□□ 0.99
HOXC11-201ENST00000243082 TRIM75PA6NK02 468 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 NOVP48745 357 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 SPECC1Q5M775 1068 aa21.22■□□□□ 0.99
HOXC11-201ENST00000243082 NLRP5P59047 1200 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 APOBEC3HQ6NTF7 200 aaKnown RBP21.21■□□□□ 0.99
HOXC11-201ENST00000243082 ZNF579Q8NAF0 562 aaKnown RBP21.21■□□□□ 0.99
HOXC11-201ENST00000243082 C7orf43Q8WVR3 580 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 WNT7AO00755 349 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 ADAMTS3O15072 1205 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 CYTH3O43739 400 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 CDC42EP5Q6NZY7 148 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 DHX40Q8IX18 779 aaKnown RBP21.21■□□□□ 0.99
HOXC11-201ENST00000243082 TEKT1Q969V4 418 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 CEP95Q96GE4 821 aa21.21■□□□□ 0.99
HOXC11-201ENST00000243082 LONRF3Q496Y0 759 aa21.2■□□□□ 0.98
HOXC11-201ENST00000243082 CEP57L1Q8IYX8 460 aa21.2■□□□□ 0.98
HOXC11-201ENST00000243082 CNKSR1Q969H4 720 aa21.2■□□□□ 0.98
HOXC11-201ENST00000243082 SH3GLB2Q9NR46 395 aa21.2■□□□□ 0.98
HOXC11-201ENST00000243082 ZNF219Q9P2Y4 722 aaPredicted RBP21.2■□□□□ 0.98
HOXC11-201ENST00000243082 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.2■□□□□ 0.98
HOXC11-201ENST00000243082 ADAMTSL1Q8N6G6 1762 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 TUBE1Q9UJT0 475 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 MTMR7Q9Y216 660 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 DPCR1Q3MIW9 517 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 STRIP1Q5VSL9 837 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 KRBA2Q6ZNG9 492 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 RASGRP2Q7LDG7 609 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 PLA2G4DQ86XP0 818 aa21.19■□□□□ 0.98
HOXC11-201ENST00000243082 GPKOWQ92917 476 aaPredicted RBP eCLIP21.19■□□□□ 0.98
HOXC11-201ENST00000243082 PLIN4Q96Q06 1357 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 GOLGA6L19H0YKK7 550 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 ZNF500O60304 480 aaPredicted RBP21.18■□□□□ 0.98
HOXC11-201ENST00000243082 GOLGA8HP0CJ92 632 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 TOP1P11387 765 aaKnown RBP21.18■□□□□ 0.98
HOXC11-201ENST00000243082 CRKP46108 304 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 NLRP12P59046 1061 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 FKBP1AP62942 108 aaKnown RBP21.18■□□□□ 0.98
HOXC11-201ENST00000243082 METTL16Q86W50 562 aaKnown RBP21.18■□□□□ 0.98
HOXC11-201ENST00000243082 LZTS2Q9BRK4 669 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 MRIQ9BWK5 157 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 OSBPL5Q9H0X9 879 aaPredicted RBP21.18■□□□□ 0.98
HOXC11-201ENST00000243082 FAM13BQ9NYF5 915 aa21.18■□□□□ 0.98
HOXC11-201ENST00000243082 KLRF2D3W0D1 207 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 ECE2O60344 883 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 CALML3P27482 149 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 ZNF75DP51815 510 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 DACT2Q5SW24 774 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 TYW1BQ6NUM6 668 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 ELOA2Q8IYF1 753 aaPredicted RBP21.17■□□□□ 0.98
HOXC11-201ENST00000243082 NAT10Q9H0A0 1025 aaKnown RBP21.17■□□□□ 0.98
HOXC11-201ENST00000243082 CSRNP2Q9H175 543 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 BIN1O00499 593 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 TTC38Q5R3I4 469 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 CNNM3Q8NE01 707 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 ZDHHC15Q96MV8 337 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 ZNF830Q96NB3 372 aaPredicted RBP21.17■□□□□ 0.98
HOXC11-201ENST00000243082 TRIM5Q9C035 493 aa21.17■□□□□ 0.98
HOXC11-201ENST00000243082 BECN2A8MW95 431 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 BMP15O95972 392 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 MDM2Q00987 491 aaPredicted RBP21.16■□□□□ 0.98
HOXC11-201ENST00000243082 PNOCQ13519 176 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 ZRSR1Q15695 479 aaKnown RBP21.16■□□□□ 0.98
HOXC11-201ENST00000243082 ZNF174Q15697 407 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 WWC2Q6AWC2 1192 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 SARM1Q6SZW1 724 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 PIK3AP1Q6ZUJ8 805 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 USP49Q70CQ1 688 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 BLIDQ8IZY5 108 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 BPIFA3Q9BQP9 254 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 SPZ1Q9BXG8 430 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 SERPINB13Q9UIV8 391 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 SCN9AQ15858 1988 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 IGKV6D-41A0A0C4DH26 115 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 AKR1B1P15121 316 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 TRAPPC10P48553 1259 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 NFIAQ12857 509 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 USP17L2Q6R6M4 530 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 KIAA0825Q8IV33 1275 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 FOXP4Q8IVH2 680 aaPredicted RBP21.16■□□□□ 0.98
HOXC11-201ENST00000243082 AOPEPQ8N6M6 819 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 SPC24Q8NBT2 197 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 PDGFDQ9GZP0 370 aaPredicted RBP21.16■□□□□ 0.98
HOXC11-201ENST00000243082 MTMR4Q9NYA4 1195 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 PCDHA4Q9UN74 947 aa21.16■□□□□ 0.98
HOXC11-201ENST00000243082 M0R2N6 131 aa21.15■□□□□ 0.98
HOXC11-201ENST00000243082 PARP1P09874 1014 aaKnown RBP21.15■□□□□ 0.98
HOXC11-201ENST00000243082 CPVLQ9H3G5 476 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms