RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 MCM4P33991 863 aa9.62□□□□□ -0.87
CXCR4-201ENST00000241393 AMPHP49418 695 aa9.62□□□□□ -0.87
CXCR4-201ENST00000241393 MTHFSDQ2M296 383 aaKnown RBP9.62□□□□□ -0.87
CXCR4-201ENST00000241393 C20orf204Q6ZNR8 217 aa9.62□□□□□ -0.87
CXCR4-201ENST00000241393 NEDD1Q8NHV4 660 aa9.62□□□□□ -0.87
CXCR4-201ENST00000241393 EMILIN2Q9BXX0 1053 aa9.62□□□□□ -0.87
CXCR4-201ENST00000241393 SOX17Q9H6I2 414 aaPredicted RBP9.62□□□□□ -0.87
CXCR4-201ENST00000241393 STARD13Q9Y3M8 1113 aa9.62□□□□□ -0.87
CXCR4-201ENST00000241393 ALBP02768 609 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 CELA2BP08218 269 aaPredicted RBP9.61□□□□□ -0.87
CXCR4-201ENST00000241393 PTMSP20962 102 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 CEBPAP49715 358 aaPredicted RBP9.61□□□□□ -0.87
CXCR4-201ENST00000241393 PIP4K2BP78356 416 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 L1TD1Q5T7N2 865 aaKnown RBP9.61□□□□□ -0.87
CXCR4-201ENST00000241393 TTC22Q5TAA0 569 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 TREML4Q6UXN2 200 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 METTL16Q86W50 562 aaKnown RBP9.61□□□□□ -0.87
CXCR4-201ENST00000241393 SEC31BQ9NQW1 1179 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 TSPYL4Q9UJ04 414 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 MSH6P52701 1360 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 CEP170BQ9Y4F5 1589 aaPredicted RBP9.61□□□□□ -0.87
CXCR4-201ENST00000241393 SPDYE3A6NKU9 549 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 B3GALT4O96024 378 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 AP3B2Q13367 1082 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 LRRC14Q15048 493 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 NECAB3Q96P71 396 aaPredicted RBP9.61□□□□□ -0.87
CXCR4-201ENST00000241393 KIF2CQ99661 725 aa9.61□□□□□ -0.87
CXCR4-201ENST00000241393 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.61□□□□□ -0.87
CXCR4-201ENST00000241393 CACNA1FO60840 1977 aa9.6□□□□□ -0.87
CXCR4-201ENST00000241393 NWD1Q149M9 1564 aa9.6□□□□□ -0.87
CXCR4-201ENST00000241393 PXDNLA1KZ92 1463 aa9.6□□□□□ -0.87
CXCR4-201ENST00000241393 GSPT1P15170 499 aaKnown RBP9.6□□□□□ -0.87
CXCR4-201ENST00000241393 AFF1P51825 1210 aaKnown RBP9.6□□□□□ -0.87
CXCR4-201ENST00000241393 RPS26P62854 115 aaKnown RBP9.6□□□□□ -0.87
CXCR4-201ENST00000241393 KRT24Q2M2I5 525 aa9.6□□□□□ -0.87
CXCR4-201ENST00000241393 HP1BP3Q5SSJ5 553 aaPredicted RBP9.6□□□□□ -0.87
CXCR4-201ENST00000241393 STK31Q9BXU1 1019 aa9.6□□□□□ -0.87
CXCR4-201ENST00000241393 CHMP4AQ9BY43 222 aa9.6□□□□□ -0.87
CXCR4-201ENST00000241393 OSGEPQ9NPF4 335 aa9.6□□□□□ -0.87
CXCR4-201ENST00000241393 MARF1Q9Y4F3 1742 aaKnown RBP9.6□□□□□ -0.87
CXCR4-201ENST00000241393 MAP3K5Q99683 1374 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 GNAT3A8MTJ3 354 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 HOXC9P31274 260 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 RABEP1Q15276 862 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 CCDC30Q5VVM6 783 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 C9orf131Q5VYM1 1079 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 MSL1Q68DK7 614 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 CASC1Q6TDU7 716 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 ERMP1Q7Z2K6 904 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 RRAGCQ9HB90 399 aa9.59□□□□□ -0.87
CXCR4-201ENST00000241393 ISY1Q9ULR0 285 aaKnown RBP9.59□□□□□ -0.87
CXCR4-201ENST00000241393 RGPD8O14715 1765 aaPredicted RBP9.59□□□□□ -0.87
CXCR4-201ENST00000241393 N4BP2Q86UW6 1770 aaPredicted RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 K7ELQ4 463 aaPredicted RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 HSP90AB1P08238 724 aaKnown RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 GNAI3P08754 354 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 ESRRAP11474 423 aaPredicted RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 SCARA3Q6AZY7 606 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 VN1R5Q7Z5H4 357 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 SVOPQ8N4V2 548 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 DTWD1Q8N5C7 304 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 MEIS3Q99687 375 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 SH2B1Q9NRF2 756 aaPredicted RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 FAM208AQ9UK61 1670 aaKnown RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 GNAI2P04899 355 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 KCNA6P17658 529 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 NME2P22392 152 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 GBP2P32456 591 aaPredicted RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 C19orf57Q0VDD7 668 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 KLHL23Q8NBE8 558 aa9.58□□□□□ -0.88
CXCR4-201ENST00000241393 DDX41Q9UJV9 622 aaKnown RBP9.58□□□□□ -0.88
CXCR4-201ENST00000241393 ADGRL3Q9HAR2 1447 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 FBXO24O75426 580 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 CYP11A1P05108 521 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 RAB3GAP1Q15042 981 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 LYPD4Q6UWN0 246 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 VPS37DQ86XT2 251 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 ZNF775Q96BV0 537 aaPredicted RBP9.57□□□□□ -0.88
CXCR4-201ENST00000241393 SPATA32Q96LK8 384 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 TMEM74Q96NL1 305 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 GBP4Q96PP9 640 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 CYP8B1Q9UNU6 501 aa9.57□□□□□ -0.88
CXCR4-201ENST00000241393 PHRF1Q9P1Y6 1649 aaKnown RBP9.57□□□□□ -0.88
CXCR4-201ENST00000241393 REC8O95072 547 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 HOXB7P09629 217 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 EPHA1P21709 976 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 LIG3P49916 1009 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 RAC1P63000 192 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 TAF7Q15545 349 aaPredicted RBP9.56□□□□□ -0.88
CXCR4-201ENST00000241393 GRIK5Q16478 980 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 TTBK2Q6IQ55 1244 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 CLEC17AQ6ZS10 378 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 C1orf229Q6ZS94 237 aaPredicted RBP9.56□□□□□ -0.88
CXCR4-201ENST00000241393 USP26Q9BXU7 913 aa9.56□□□□□ -0.88
CXCR4-201ENST00000241393 ZNF142P52746 1687 aaPredicted RBP9.56□□□□□ -0.88
CXCR4-201ENST00000241393 CHD2O14647 1828 aaKnown RBP9.56□□□□□ -0.88
CXCR4-201ENST00000241393 FSD2A1L4K1 749 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 SHISA8B8ZZ34 492 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 ENC1O14682 589 aa9.55□□□□□ -0.88
CXCR4-201ENST00000241393 SF3A1Q15459 793 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms