RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 PLEKHG4Q58EX7 1191 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 LRCH2Q5VUJ6 765 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 SLC4A10Q6U841 1118 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 CENPQQ7L2Z9 268 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 TMC7Q7Z402 723 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 ANKMY2Q8IV38 441 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 FAM200AQ8TCP9 573 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.26□□□□□ -1.73
UFM1-201ENST00000239878 RNF34Q969K3 372 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 ZNF594Q96JF6 807 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 SENP7Q9BQF6 1050 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 MED4Q9NPJ6 270 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 TYW1Q9NV66 732 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 C9orf78Q9NZ63 289 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 DNMT3AQ9Y6K1 912 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.26□□□□□ -1.73
UFM1-201ENST00000239878 MORC2Q9Y6X9 1032 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 GREB1LQ9C091 1923 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 MYO5AQ9Y4I1 1855 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 MPHOSPH10O00566 681 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 DNAJA1P31689 397 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 ZKSCAN8Q15776 578 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 CCDC96Q2M329 555 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 MAP9Q49MG5 647 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 DPY19L2Q6NUT2 758 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 CTR9Q6PD62 1173 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 SYT10Q6XYQ8 523 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 ITPRIPQ8IWB1 547 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 ZNF687Q8N1G0 1237 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 SUPT20HQ8NEM7 779 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 HELBQ8NG08 1087 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 CCSER2Q9H7U1 834 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 CXXC1Q9P0U4 656 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 JRKLQ9Y4A0 524 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 LAMA4Q16363 1823 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 TREHO43280 583 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 KIF1CO43896 1103 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 CYP2C19P33261 490 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 SCNN1DP51172 638 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 NCBP1Q09161 790 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 PUM3Q15397 648 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 DACT2Q5SW24 774 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 RNF187Q5TA31 235 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 PRPF38AQ8NAV1 312 aaKnown RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 KLHDC4Q8TBB5 520 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 ZNF384Q8TF68 577 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 FAM84BQ96KN1 310 aaPredicted RBP4.26□□□□□ -1.73
UFM1-201ENST00000239878 C8orf48Q96LL4 319 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 IER2Q9BTL4 223 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 SPC25Q9HBM1 224 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 PARP2Q9UGN5 583 aa4.26□□□□□ -1.73
UFM1-201ENST00000239878 CFAP99D6REC4 459 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 MYO1CO00159 1063 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 PPP1R12AO14974 1030 aaPredicted RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 SH3BP5O60239 455 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 GSCP56915 257 aaPredicted RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 CLDN10P78369 228 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 C1QTNF12Q5T7M4 302 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 DEPDC4Q8N2C3 294 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 ITFG2Q969R8 447 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 MRIQ9BWK5 157 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 COA1Q9GZY4 146 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 ZNF277Q9NRM2 450 aaPredicted RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 CCDC39Q9UFE4 941 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 PA2G4Q9UQ80 394 aaKnown RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 BCS1LQ9Y276 419 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 ATRNL1Q5VV63 1379 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 AOX1Q06278 1338 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 KLHL33A6NCF5 533 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 SRGAP3O43295 1099 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 CTIFO43310 598 aaKnown RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 IGHMBP2P38935 993 aaKnown RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 SSR1P43307 286 aaKnown RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 NAA30Q147X3 362 aaPredicted RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 AOC3Q16853 763 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 C11orf91Q3C1V1 193 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 DPP8Q6V1X1 898 aaPredicted RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 ARMCX6Q7L4S7 300 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 GPC2Q8N158 579 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 CERS5Q8N5B7 392 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 KIF18AQ8NI77 898 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 LPIN2Q92539 896 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 IL17RAQ96F46 866 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 IRX2Q9BZI1 471 aaPredicted RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 SRA1Q9HD15 236 aaKnown RBP4.25□□□□□ -1.73
UFM1-201ENST00000239878 STAP2Q9UGK3 403 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 GGA1Q9UJY5 639 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 ZNRF3Q9ULT6 936 aa4.25□□□□□ -1.73
UFM1-201ENST00000239878 RPAP1Q9BWH6 1393 aaPredicted RBP4.24□□□□□ -1.73
UFM1-201ENST00000239878 PHIPQ8WWQ0 1821 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 GAKO14976 1311 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 GLTPD2A6NH11 291 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 PRMT3O60678 531 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 IGHDP01880 384 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 NPR3P17342 541 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 DDIT3P35638 169 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 TFCP2Q12800 502 aa4.24□□□□□ -1.73
UFM1-201ENST00000239878 NOLC1Q14978 699 aaKnown RBP eCLIP4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms