RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 SEPT4O43236 478 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 ACRP10323 421 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 PTPREP23469 700 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 SSTR3P32745 418 aaPredicted RBP10.25□□□□□ -0.77
IFT43-201ENST00000238628 CCNA1P78396 465 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 SLFN5Q08AF3 891 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 FAAP100Q0VG06 881 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 MTMR2Q13614 643 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 GORABQ5T7V8 394 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 MFSD5Q6N075 450 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 PSRC1Q6PGN9 363 aaPredicted RBP10.25□□□□□ -0.77
IFT43-201ENST00000238628 TBC1D9Q6ZT07 1266 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 SPATA5Q8NB90 893 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 ZNF384Q8TF68 577 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 GTF3C2Q8WUA4 911 aaPredicted RBP10.25□□□□□ -0.77
IFT43-201ENST00000238628 NSUN4Q96CB9 384 aaKnown RBP10.25□□□□□ -0.77
IFT43-201ENST00000238628 MTIF3Q9H2K0 278 aaKnown RBP10.25□□□□□ -0.77
IFT43-201ENST00000238628 HMG20BQ9P0W2 317 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 PI4KBQ9UBF8 816 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 HERC5Q9UII4 1024 aaKnown RBP10.25□□□□□ -0.77
IFT43-201ENST00000238628 NOB1Q9ULX3 412 aaKnown RBP10.25□□□□□ -0.77
IFT43-201ENST00000238628 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 IVNS1ABPQ9Y6Y0 642 aa10.25□□□□□ -0.77
IFT43-201ENST00000238628 C19orf81C9J6K1 198 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 RFXAPO00287 272 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 HOXC6P09630 235 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 CSF2RAP15509 400 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 BACE1P56817 501 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 FAM47AQ5JRC9 791 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 TEX11Q8IYF3 940 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 TMEM199Q8N511 208 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 TOX2Q96NM4 488 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
IFT43-201ENST00000238628 WDR18Q9BV38 432 aa10.24□□□□□ -0.77
IFT43-201ENST00000238628 USP17L10C9JJH3 530 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 SRGAP3O43295 1099 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 ASNSP08243 561 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 POU3F3P20264 500 aaPredicted RBP10.23□□□□□ -0.77
IFT43-201ENST00000238628 RABGGTBP53611 331 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 PI16Q6UXB8 463 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 ANKRD33Q7Z3H0 272 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 RNF180Q86T96 592 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 DPP9Q86TI2 863 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 FOXP4Q8IVH2 680 aaPredicted RBP10.23□□□□□ -0.77
IFT43-201ENST00000238628 SH3RF3Q8TEJ3 882 aaPredicted RBP10.23□□□□□ -0.77
IFT43-201ENST00000238628 MEIS3Q99687 375 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 TRIM34Q9BYJ4 488 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 API5Q9BZZ5 524 aaKnown RBP10.23□□□□□ -0.77
IFT43-201ENST00000238628 DHX36Q9H2U1 1008 aaKnown RBP10.23□□□□□ -0.77
IFT43-201ENST00000238628 LRP2BPQ9P2M1 347 aa10.23□□□□□ -0.77
IFT43-201ENST00000238628 PTPRZ1P23471 2315 aaPredicted RBP10.22□□□□□ -0.77
IFT43-201ENST00000238628 A0A1W2PQ45 241 aaPredicted RBP10.22□□□□□ -0.77
IFT43-201ENST00000238628 A0A1W2PQY0 241 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 GFRA3O60609 400 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 BAG3O95817 575 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 FGBP02675 491 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 MYOGP15173 224 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 GRB14Q14449 540 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 PRAMEF19Q5SWL8 479 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 KRT40Q6A162 431 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 CRACR2BQ8N4Y2 399 aaPredicted RBP10.22□□□□□ -0.77
IFT43-201ENST00000238628 CDCA7LQ96GN5 454 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 XPNPEP3Q9NQH7 507 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 AATFQ9NY61 560 aaKnown RBP eCLIP10.22□□□□□ -0.77
IFT43-201ENST00000238628 RABGAP1Q9Y3P9 1069 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.22□□□□□ -0.77
IFT43-201ENST00000238628 XIRP2A4UGR9 3374 aa10.22□□□□□ -0.77
IFT43-201ENST00000238628 DCXO43602 365 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 GNAI3P08754 354 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 UQCRFS1P1P0C7P4 283 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 RARBP10826 455 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 PLCG2P16885 1265 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 ARID4AP29374 1257 aaPredicted RBP10.21□□□□□ -0.77
IFT43-201ENST00000238628 JAG1P78504 1218 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 OLFML2BQ68BL8 750 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 NAA16Q6N069 864 aaPredicted RBP10.21□□□□□ -0.77
IFT43-201ENST00000238628 MAPKAPK5Q8IW41 473 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 FAM178BQ8IXR5 827 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 SP7Q8TDD2 431 aaPredicted RBP10.21□□□□□ -0.77
IFT43-201ENST00000238628 TGFBRAP1Q8WUH2 860 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 ANKS1AQ92625 1134 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 MFSD14AQ96MC6 490 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 CERS4Q9HA82 394 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 STARD7Q9NQZ5 370 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 GINM1Q9NU53 330 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 TBX21Q9UL17 535 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 PCDHA11Q9Y5I1 949 aa10.21□□□□□ -0.77
IFT43-201ENST00000238628 SIPA1L1O43166 1804 aa10.21□□□□□ -0.78
IFT43-201ENST00000238628 CDK5RAP2Q96SN8 1893 aa10.21□□□□□ -0.78
IFT43-201ENST00000238628 CACNA1BQ00975 2339 aa10.21□□□□□ -0.78
IFT43-201ENST00000238628 GDF11O95390 407 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 PGK1P00558 417 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 IGHA2P01877 340 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 MCAMP43121 646 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 PTPN5P54829 565 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 PPP4CP60510 307 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 G3BP1Q13283 466 aaKnown RBP eCLIP10.2□□□□□ -0.78
IFT43-201ENST00000238628 USP17L2Q6R6M4 530 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 HFE2Q6ZVN8 426 aa10.2□□□□□ -0.78
IFT43-201ENST00000238628 OTOP2Q7RTS6 562 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms