RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 CAPZA3Q96KX2 299 aa14.55□□□□□ -0.08
MSH2-201ENST00000233146 WWC3Q9ULE0 1092 aa14.55□□□□□ -0.08
MSH2-201ENST00000233146 A0A1B0GVG6 124 aa14.55□□□□□ -0.08
MSH2-201ENST00000233146 PDE2AO00408 941 aaPredicted RBP14.55□□□□□ -0.08
MSH2-201ENST00000233146 GLE1Q53GS7 698 aaKnown RBP14.55□□□□□ -0.08
MSH2-201ENST00000233146 APTXQ7Z2E3 356 aaKnown RBP14.55□□□□□ -0.08
MSH2-201ENST00000233146 METTL16Q86W50 562 aaKnown RBP14.55□□□□□ -0.08
MSH2-201ENST00000233146 IQCKQ8N0W5 287 aa14.55□□□□□ -0.08
MSH2-201ENST00000233146 SEC16BQ96JE7 1060 aa14.55□□□□□ -0.08
MSH2-201ENST00000233146 MED23Q9ULK4 1368 aa14.55□□□□□ -0.08
MSH2-201ENST00000233146 A0A0D9SFI3 127 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 GMNCA6NCL1 334 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 C5orf60A6NFR6 353 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 PDLIM1O00151 329 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 DIAPH2O60879 1101 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 LRRC23Q53EV4 343 aaPredicted RBP14.54□□□□□ -0.08
MSH2-201ENST00000233146 USPL1Q5W0Q7 1092 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 CNGA4Q8IV77 575 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 MMGT1Q8N4V1 131 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 PCDHA5Q9Y5H7 936 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 ZNF233A6NK53 670 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 LUC7L3O95232 432 aaKnown RBP14.54□□□□□ -0.08
MSH2-201ENST00000233146 MYL1P05976 194 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 NPM1P06748 294 aaKnown RBP eCLIP14.54□□□□□ -0.08
MSH2-201ENST00000233146 PPP1R7Q15435 360 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 CCDC70Q6NSX1 233 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 NDST4Q9H3R1 872 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 ZMYM6O95789 1325 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 PPLO60437 1756 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 CASP14P31944 242 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 QPCTQ16769 361 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 PPP1R15BQ5SWA1 713 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 NUGGCQ68CJ6 796 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 CD302Q8IX05 232 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 AGAP11Q8TF27 550 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 SAMSN1Q9NSI8 373 aaKnown RBP14.54□□□□□ -0.08
MSH2-201ENST00000233146 DMGDHQ9UI17 866 aaKnown RBP14.54□□□□□ -0.08
MSH2-201ENST00000233146 MYH8P13535 1937 aa14.54□□□□□ -0.08
MSH2-201ENST00000233146 ALADP13716 330 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 FLIIQ13045 1269 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 ITGB3BPQ13352 177 aaPredicted RBP14.53□□□□□ -0.08
MSH2-201ENST00000233146 CUL3Q13618 768 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 RRP12Q5JTH9 1297 aaKnown RBP14.53□□□□□ -0.08
MSH2-201ENST00000233146 HDAC7Q8WUI4 952 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 HINFPQ9BQA5 517 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 PPANQ9NQ55 473 aaKnown RBP14.53□□□□□ -0.08
MSH2-201ENST00000233146 ABCC1P33527 1531 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 UBN2Q6ZU65 1347 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 FAM237AA0A1B0GTK4 181 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 JAKMIP2Q96AA8 810 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 MED15Q96RN5 788 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 ZCWPW1Q9H0M4 648 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 GUCA1BQ9UMX6 200 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 STXBP3O00186 592 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 FXR1P51114 621 aaKnown RBP eCLIP14.53□□□□□ -0.08
MSH2-201ENST00000233146 ZBED6P86452 979 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 C2orf54Q08AI8 447 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 MCM10Q7L590 875 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 MAF1Q9H063 256 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 TRIM10Q9UDY6 481 aa14.53□□□□□ -0.08
MSH2-201ENST00000233146 SH3TC1Q8TE82 1336 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 GPR75-ASB3A0A0A6YYF3 556 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 DPPA5A6NC42 116 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 TRAPPC3O43617 180 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 GYPCP04921 128 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 EZH2Q15910 746 aaKnown RBP14.52□□□□□ -0.08
MSH2-201ENST00000233146 CCDC38Q502W7 563 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 HSP90AB4PQ58FF6 505 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 CCDC178Q5BJE1 867 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 IQCEQ6IPM2 695 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 APLFQ8IW19 511 aaPredicted RBP14.52□□□□□ -0.08
MSH2-201ENST00000233146 CACNA2D3Q8IZS8 1091 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 RBM17Q96I25 401 aaKnown RBP14.52□□□□□ -0.08
MSH2-201ENST00000233146 ATP6V1G3Q96LB4 118 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 SLF1Q9BQI6 1058 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 OSBPL1AQ9BXW6 950 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 ASB3Q9Y575 518 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 EMILIN1Q9Y6C2 1016 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 CARMIL3Q8ND23 1372 aa14.52□□□□□ -0.08
MSH2-201ENST00000233146 RASSF10A6NK89 507 aa14.52□□□□□ -0.09
MSH2-201ENST00000233146 ANO1Q5XXA6 986 aa14.52□□□□□ -0.09
MSH2-201ENST00000233146 TEX9Q8N6V9 391 aa14.52□□□□□ -0.09
MSH2-201ENST00000233146 MMADHCQ9H3L0 296 aaPredicted RBP14.52□□□□□ -0.09
MSH2-201ENST00000233146 WDR35Q9P2L0 1181 aa14.52□□□□□ -0.09
MSH2-201ENST00000233146 REXO2Q9Y3B8 237 aaKnown RBP14.52□□□□□ -0.09
MSH2-201ENST00000233146 ATP2C2O75185 946 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 POLR3DP05423 398 aaPredicted RBP14.51□□□□□ -0.09
MSH2-201ENST00000233146 TNFRSF8P28908 595 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 ZNF268Q14587 947 aaPredicted RBP14.51□□□□□ -0.09
MSH2-201ENST00000233146 CYP26C1Q6V0L0 522 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 CAGE1Q8TC20 777 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 BICD1Q96G01 975 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 LRRC1Q9BTT6 524 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 KCNMB3Q9NPA1 279 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.51□□□□□ -0.09
MSH2-201ENST00000233146 MROH1Q8NDA8 1641 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 ANKARQ7Z5J8 1434 aa14.51□□□□□ -0.09
MSH2-201ENST00000233146 HMGB1P1B2RPK0 211 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms