RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 MYO3BQ8WXR4 1341 aa23.46■■□□□ 1.35
SNX3-201ENST00000230085 CDKL5O76039 1030 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 SYKP43405 635 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 UBASH3AP57075 661 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 GPR161Q8N6U8 529 aaKnown RBP23.45■■□□□ 1.34
SNX3-201ENST00000230085 DPF2Q92785 391 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 ERCC4Q92889 916 aaPredicted RBP23.45■■□□□ 1.34
SNX3-201ENST00000230085 OSBP2Q969R2 916 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 L3MBTL3Q96JM7 780 aaPredicted RBP23.45■■□□□ 1.34
SNX3-201ENST00000230085 CNOT7Q9UIV1 285 aaKnown RBP23.45■■□□□ 1.34
SNX3-201ENST00000230085 ZMYM6O95789 1325 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 KLF18A0A0U1RQI7 1052 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 STX10O60499 249 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 WDHD1O75717 1129 aaPredicted RBP23.45■■□□□ 1.34
SNX3-201ENST00000230085 EPS15P42566 896 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 ANTXR2P58335 489 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 GPRC5DQ9NZD1 345 aa23.45■■□□□ 1.34
SNX3-201ENST00000230085 MYO5AQ9Y4I1 1855 aaKnown RBP23.44■■□□□ 1.34
SNX3-201ENST00000230085 NID2Q14112 1375 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 GOLGA8BA8MQT2 603 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 POTECB2RU33 542 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 KIF28PB7ZC32 967 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 CUTAO60888 179 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 FOSBP53539 338 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 MAP3K9P80192 1104 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 JAKMIP3Q5VZ66 844 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 HOMER1Q86YM7 354 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 MICALL2Q8IY33 904 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 LRRN4CLQ8ND94 238 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 APPBP2Q92624 585 aa23.44■■□□□ 1.34
SNX3-201ENST00000230085 USP17L8P0C7I0 530 aa23.43■■□□□ 1.34
SNX3-201ENST00000230085 LMOD1P29536 600 aaPredicted RBP23.43■■□□□ 1.34
SNX3-201ENST00000230085 CT47A1Q5JQC4 288 aaPredicted RBP23.43■■□□□ 1.34
SNX3-201ENST00000230085 TEX35Q5T0J7 233 aa23.43■■□□□ 1.34
SNX3-201ENST00000230085 NT5DC1Q5TFE4 455 aa23.43■■□□□ 1.34
SNX3-201ENST00000230085 RSRC2Q7L4I2 434 aaKnown RBP23.43■■□□□ 1.34
SNX3-201ENST00000230085 MNS1Q8NEH6 495 aa23.43■■□□□ 1.34
SNX3-201ENST00000230085 MAP3K14Q99558 947 aa23.43■■□□□ 1.34
SNX3-201ENST00000230085 TSPYL1Q9H0U9 437 aa23.43■■□□□ 1.34
SNX3-201ENST00000230085 PIH1D3Q9NQM4 214 aaKnown RBP23.43■■□□□ 1.34
SNX3-201ENST00000230085 TTF2Q9UNY4 1162 aaKnown RBP23.43■■□□□ 1.34
SNX3-201ENST00000230085 STK36Q9NRP7 1315 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 LDHBP07195 334 aaKnown RBP23.42■■□□□ 1.34
SNX3-201ENST00000230085 TUBB4BP68371 445 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 MUM1L1Q5H9M0 696 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 RRAGCQ9HB90 399 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 LRP2BPQ9P2M1 347 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 VWA3AA6NCI4 1184 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 CPLX1O14810 134 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 POLR3DP05423 398 aaPredicted RBP23.42■■□□□ 1.34
SNX3-201ENST00000230085 OGFOD1Q8N543 542 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 SUGT1Q9Y2Z0 365 aa23.42■■□□□ 1.34
SNX3-201ENST00000230085 WDR90Q96KV7 1748 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 FANCGO15287 622 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 FGAP02671 866 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 TOP1P11387 765 aaKnown RBP23.41■■□□□ 1.34
SNX3-201ENST00000230085 ATP1A3P13637 1013 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 SHC4Q6S5L8 630 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 RABGGTAQ92696 567 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 NMRK2Q9NPI5 230 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 PPP2R2CQ9Y2T4 447 aa23.41■■□□□ 1.34
SNX3-201ENST00000230085 EGFRP00533 1210 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 SAMD7Q7Z3H4 446 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 TRIML1Q8N9V2 468 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 HACL1Q9UJ83 578 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 H7C1D1 291 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 ZNF18P17022 549 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 SPTY2D1Q68D10 685 aaPredicted RBP23.4■■□□□ 1.34
SNX3-201ENST00000230085 TXLNBQ8N3L3 684 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 PSD3Q9NYI0 1048 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 RAI14Q9P0K7 980 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 HOOK1Q9UJC3 728 aaKnown RBP23.4■■□□□ 1.34
SNX3-201ENST00000230085 MRFAP1Q9Y605 127 aa23.4■■□□□ 1.34
SNX3-201ENST00000230085 IDH1O75874 414 aaKnown RBP23.39■■□□□ 1.33
SNX3-201ENST00000230085 SERPINC1P01008 464 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 ZNF280AP59817 542 aaPredicted RBP23.39■■□□□ 1.33
SNX3-201ENST00000230085 TUBB2AQ13885 445 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 TTF1Q15361 905 aaPredicted RBP23.39■■□□□ 1.33
SNX3-201ENST00000230085 RBM26Q5T8P6 1007 aaKnown RBP23.39■■□□□ 1.33
SNX3-201ENST00000230085 OTUD7BQ6GQQ9 843 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 KRBA2Q6ZNG9 492 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 CHST3Q7LGC8 479 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 RALYLQ86SE5 291 aaKnown RBP23.39■■□□□ 1.33
SNX3-201ENST00000230085 ZNF384Q8TF68 577 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 TUBB2BQ9BVA1 445 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 ANGEL1Q9UNK9 670 aaKnown RBP23.39■■□□□ 1.33
SNX3-201ENST00000230085 PCDHAC2Q9Y5I4 1007 aa23.39■■□□□ 1.33
SNX3-201ENST00000230085 BIN1O00499 593 aa23.38■■□□□ 1.33
SNX3-201ENST00000230085 MDM2Q00987 491 aaPredicted RBP23.38■■□□□ 1.33
SNX3-201ENST00000230085 MECOMQ03112 1051 aa23.38■■□□□ 1.33
SNX3-201ENST00000230085 DIXDC1Q155Q3 683 aa23.38■■□□□ 1.33
SNX3-201ENST00000230085 CPLX2Q6PUV4 134 aaKnown RBP23.38■■□□□ 1.33
SNX3-201ENST00000230085 METTL16Q86W50 562 aaKnown RBP23.38■■□□□ 1.33
SNX3-201ENST00000230085 GPBP1L1Q9HC44 474 aaPredicted RBP23.38■■□□□ 1.33
SNX3-201ENST00000230085 HDAC9Q9UKV0 1011 aa23.38■■□□□ 1.33
SNX3-201ENST00000230085 NAP1L2Q9ULW6 460 aaPredicted RBP23.38■■□□□ 1.33
SNX3-201ENST00000230085 SCN4AP35499 1836 aa23.38■■□□□ 1.33
SNX3-201ENST00000230085 IQCA1LA6NCM1 817 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 TBC1D8O95759 1140 aa23.37■■□□□ 1.33
SNX3-201ENST00000230085 VEGFAP15692 232 aaPredicted RBP23.37■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms