RNA–Protein interactions for RNA: ENST00000228425.10

PPFIBP1-201, Transcript of PPFIA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPFIBP1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIBP1-201ENST00000228425 TBC1D12O60347 775 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 KRT3P12035 628 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 SDCCAG8Q86SQ7 713 aaPredicted RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 CCDC170Q8IYT3 715 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 C6orf50Q9HD87 102 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 BABAM1Q9NWV8 329 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZRANB1Q9UGI0 708 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 CD2APQ9Y5K6 639 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 FAM208AQ9UK61 1670 aaKnown RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 H0YC42 278 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 SDSP20132 328 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 PDE1AP54750 535 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 E2F5Q15329 346 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZKSCAN8Q15776 578 aaPredicted RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 C8orf76Q96K31 380 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 BAG1Q99933 345 aaPredicted RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 NBPF3Q9H094 633 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 IFIT3O14879 490 aaKnown RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 RFC4P35249 363 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 GNL1P36915 607 aaPredicted RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 PEX19P40855 299 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 UBA7P41226 1012 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 MNAT1P51948 309 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 UAP1Q16222 522 aaPredicted RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZNF449Q6P9G9 518 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 C16orf87Q6PH81 154 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 SHQ1Q6PI26 577 aaKnown RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 C1orf228Q6PIY5 440 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 CLEC4GQ6UXB4 293 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 CTAGE6Q86UF2 777 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 PALM2Q8IXS6 379 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 CACNA2D3Q8IZS8 1091 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 RIOK1Q9BRS2 568 aaKnown RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZHX1Q9UKY1 873 aaPredicted RBP6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 ATP6V0A2Q9Y487 856 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 SPATA31A6Q5VVP1 1343 aa6.61□□□□□ -1.35
PPFIBP1-201ENST00000228425 CETN3O15182 167 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 NR1I2O75469 434 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CWC27Q6UX04 472 aaKnown RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 IL1RAPL2Q9NP60 686 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 RMND1Q9NWS8 449 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 DBF4Q9UBU7 674 aaPredicted RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 SCINQ9Y6U3 715 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CASZ1Q86V15 1759 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 KCNA2P16389 499 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ADD2P35612 726 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CASP2P42575 452 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 GSDMDP57764 484 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 SESN3P58005 492 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 PICALMQ13492 652 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CEP85LQ5SZL2 805 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 RSRC2Q7L4I2 434 aaKnown RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 NUTM1Q86Y26 1132 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 IFT122Q9HBG6 1241 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ECHDC1Q9NTX5 307 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 SLAIN2Q9P270 581 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 SUFUQ9UMX1 484 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CDH23Q9H251 3354 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZNF646O15015 1829 aaPredicted RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 IRF6O14896 467 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 AKR1B10O60218 316 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 STX10O60499 249 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 GTF2A1P52655 376 aaPredicted RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 KIF11P52732 1056 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 RBBP5Q15291 538 aaKnown RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 SF3B3Q15393 1217 aaKnown RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 PPP1R7Q15435 360 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 TBCCQ15814 346 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 AKNAD1Q5T1N1 836 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 GBP6Q6ZN66 633 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 LMNTD2Q8IXW0 634 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ANKRD24Q8TF21 1146 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 N4BP2L2Q92802 583 aaPredicted RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ATP6V0A1Q93050 837 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 TRIM47Q96LD4 638 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 VEZTQ9HBM0 779 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 VCX3AQ9NNX9 186 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 KCNK9Q9NPC2 374 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 RABL2AQ9UBK7 228 aaPredicted RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 YTHDC2Q9H6S0 1430 aaKnown RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 DPYSL4O14531 572 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 GNPATO15228 680 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZNF853P0CG23 659 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 KRT10P13645 584 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 PPFIA1Q13136 1202 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 MKRN4PQ13434 485 aaPredicted RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 NEDD9Q14511 834 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CEP128Q6ZU80 1094 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 MGARPQ8TDB4 240 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 KRT23Q9C075 422 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZNF408Q9H9D4 720 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 ZNF213O14771 459 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 BACH1O14867 736 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 SMIM24O75264 130 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 IVLP07476 585 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CALM1P0DP23 149 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CALM2P0DP24 149 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 CALM3P0DP25 149 aa6.6□□□□□ -1.35
PPFIBP1-201ENST00000228425 KRT222Q8N1A0 295 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms