RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 OR8K1Q8NGG5 319 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 RASSF8Q8NHQ8 419 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 RPGRIP1Q96KN7 1286 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 CENPHQ9H3R5 247 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 OPA1O60313 960 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 FMNL1O95466 1100 aaPredicted RBP15.99■□□□□ 0.15
SHPK-201ENST00000225519 RNF187Q5TA31 235 aaPredicted RBP15.99■□□□□ 0.15
SHPK-201ENST00000225519 APTXQ7Z2E3 356 aaKnown RBP15.99■□□□□ 0.15
SHPK-201ENST00000225519 NAPBQ9H115 298 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 TBC1D2BQ9UPU7 963 aa15.99■□□□□ 0.15
SHPK-201ENST00000225519 KCNJ18B7U540 433 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 PBX1P40424 430 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 KCNJ12Q14500 433 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 CDKAL1Q5VV42 579 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 SYMPKQ92797 1274 aaKnown RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 KAT2BQ92831 832 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 XBP1P17861 261 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 KRT83P78385 493 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 MRPS25P82663 173 aaKnown RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 NTRK3Q16288 839 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 ZNF579Q8NAF0 562 aaKnown RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 GIMAP7Q8NHV1 300 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 GSDMAQ96QA5 445 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 RGPD8O14715 1765 aaPredicted RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 H7C1W4 665 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 RNF225M0QZC1 329 aaPredicted RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 SEMA3EO15041 775 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 PAK1Q13153 545 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 CUL4BQ13620 913 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 GBP6Q6ZN66 633 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 OXER1Q8TDS5 423 aa15.98■□□□□ 0.15
SHPK-201ENST00000225519 FOXP1Q9H334 677 aaPredicted RBP15.98■□□□□ 0.15
SHPK-201ENST00000225519 CTDSPL2Q05D32 466 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 METTL24Q5JXM2 366 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 CCDC181Q5TID7 509 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 CCNI2Q6ZMN8 369 aaPredicted RBP15.97■□□□□ 0.15
SHPK-201ENST00000225519 NBPF3Q9H094 633 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 ITIH6Q6UXX5 1313 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 ZNF185O15231 689 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 HSF2BPO75031 334 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 LY9Q9HBG7 655 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 MYBL2P10244 700 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 IFNAR1P17181 557 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 CYLC1P35663 651 aaPredicted RBP15.97■□□□□ 0.15
SHPK-201ENST00000225519 ATP1A2P50993 1020 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 CASP7P55210 303 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 ZC3H6P61129 1189 aaKnown RBP15.97■□□□□ 0.15
SHPK-201ENST00000225519 CT47A1Q5JQC4 288 aaPredicted RBP15.97■□□□□ 0.15
SHPK-201ENST00000225519 SWT1Q5T5J6 900 aaKnown RBP15.97■□□□□ 0.15
SHPK-201ENST00000225519 TTLL7Q6ZT98 887 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 NELFBQ8WX92 580 aa15.97■□□□□ 0.15
SHPK-201ENST00000225519 MAGEC2Q9UBF1 373 aaPredicted RBP15.97■□□□□ 0.15
SHPK-201ENST00000225519 ZNF335Q9H4Z2 1342 aaPredicted RBP15.96■□□□□ 0.15
SHPK-201ENST00000225519 TARSL2A2RTX5 802 aaKnown RBP15.96■□□□□ 0.15
SHPK-201ENST00000225519 DEXIO95424 95 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 CABP4P57796 275 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 WTAPQ15007 396 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 ZNF174Q15697 407 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 B4GALNT4Q76KP1 1039 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 NKX2-3Q8TAU0 364 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 SECISBP2LQ93073 1101 aaKnown RBP15.96■□□□□ 0.15
SHPK-201ENST00000225519 JPH2Q9BR39 696 aaPredicted RBP15.96■□□□□ 0.15
SHPK-201ENST00000225519 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.96■□□□□ 0.15
SHPK-201ENST00000225519 FAM184BQ9ULE4 1060 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 OVOS2A0A0G2JMS6 1433 aa15.96■□□□□ 0.15
SHPK-201ENST00000225519 CCDC196A0A1B0GTZ2 297 aa15.96■□□□□ 0.14
SHPK-201ENST00000225519 PPP1R3GB7ZBB8 358 aa15.96■□□□□ 0.14
SHPK-201ENST00000225519 PSMD14O00487 310 aa15.96■□□□□ 0.14
SHPK-201ENST00000225519 EIF3HO15372 352 aaKnown RBP eCLIP15.96■□□□□ 0.144e-7■■■■□ 20
SHPK-201ENST00000225519 PDCLQ13371 301 aa15.96■□□□□ 0.14
SHPK-201ENST00000225519 IGDCC4Q8TDY8 1250 aa15.96■□□□□ 0.14
SHPK-201ENST00000225519 TTC26A0AVF1 554 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 GOLGA8KD6RF30 607 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 FAM217BQ9NTX9 383 aaPredicted RBP15.95■□□□□ 0.14
SHPK-201ENST00000225519 ZSWIM5Q9P217 1185 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 TRIM21P19474 475 aaKnown RBP15.95■□□□□ 0.14
SHPK-201ENST00000225519 PSMB7Q99436 277 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 STRN4Q9NRL3 753 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 MAP3K15Q6ZN16 1313 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 hCG_1642624A0A1W2PR95 340 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 KCTD16Q68DU8 428 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 MFSD6Q6ZSS7 791 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 CABS1Q96KC9 395 aa15.95■□□□□ 0.14
SHPK-201ENST00000225519 A0A087X0B3 334 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 FAM205CA6NFA0 338 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 KIF5AQ12840 1032 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 TCP11X2Q5H9J9 407 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.94■□□□□ 0.14
SHPK-201ENST00000225519 AATFQ9NY61 560 aaKnown RBP eCLIP15.94■□□□□ 0.14
SHPK-201ENST00000225519 VPS54Q9P1Q0 977 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 LIMA1Q9UHB6 759 aaKnown RBP15.94■□□□□ 0.14
SHPK-201ENST00000225519 ZNF532Q9HCE3 1301 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 STK36Q9NRP7 1315 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 CIAO1O76071 339 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 TDO2P48775 406 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 CCDC96Q2M329 555 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 POLD4Q9HCU8 107 aa15.94■□□□□ 0.14
SHPK-201ENST00000225519 SLC7A5Q01650 507 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms