RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 ZNF512BQ96KM6 892 aaPredicted RBP12.62□□□□□ -0.39
NEFM-201ENST00000221166 PANX2Q96RD6 677 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 FAM237AA0A1B0GTK4 181 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 ZRANB2O95218 330 aaKnown RBP eCLIP12.62□□□□□ -0.39
NEFM-201ENST00000221166 CYP2C19P33261 490 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 GPKOWQ92917 476 aaPredicted RBP eCLIP12.62□□□□□ -0.39
NEFM-201ENST00000221166 GSDMAQ96QA5 445 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 MED15Q96RN5 788 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 SUGCTQ9HAC7 445 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 GDAQ9Y2T3 454 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 KCNJ18B7U540 433 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 CAPN2P17655 700 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 SARSP49591 514 aaKnown RBP12.62□□□□□ -0.39
NEFM-201ENST00000221166 STIM1Q13586 685 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 KCNJ12Q14500 433 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 TMTC1Q8IUR5 882 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 CCDC148Q8NFR7 591 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 ZNHIT6Q9NWK9 470 aaKnown RBP12.62□□□□□ -0.39
NEFM-201ENST00000221166 TFCP2L1Q9NZI6 479 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 MST1RQ04912 1400 aa12.62□□□□□ -0.39
NEFM-201ENST00000221166 COPB1P53618 953 aaKnown RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 HDXQ7Z353 690 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 TTF2Q9UNY4 1162 aaKnown RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 NCAPH2Q6IBW4 605 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 CYP26C1Q6V0L0 522 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 ADGRA1Q86SQ6 560 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 RGS22Q8NE09 1264 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 BBXQ8WY36 941 aaPredicted RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 DRC1Q96MC2 740 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 NAA15Q9BXJ9 866 aaKnown RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 ABCB6Q9NP58 842 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 CWC15Q9P013 229 aaKnown RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 ADD3Q9UEY8 706 aaKnown RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 LUC7L2Q9Y383 392 aaKnown RBP12.61□□□□□ -0.39
NEFM-201ENST00000221166 WNT7AO00755 349 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 SPAG1Q07617 926 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 SLC4A9Q96Q91 983 aa12.61□□□□□ -0.39
NEFM-201ENST00000221166 ERCC3P19447 782 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 TRIM21P19474 475 aaKnown RBP12.6□□□□□ -0.39
NEFM-201ENST00000221166 ZSCAN26Q16670 478 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 KIFC2Q96AC6 838 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 ACBD3Q9H3P7 528 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 KAT14Q9H8E8 782 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 MKNK2Q9HBH9 465 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 VAT1LQ9HCJ6 419 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 RBM28Q9NW13 759 aaKnown RBP12.6□□□□□ -0.39
NEFM-201ENST00000221166 TRIM49BA6NDI0 452 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 VGLL3A8MV65 326 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 POTEB2H3BUK9 544 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 FGFR2P21802 821 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 NAP1L1P55209 391 aaKnown RBP12.6□□□□□ -0.39
NEFM-201ENST00000221166 BRD3Q15059 726 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 CCDC122Q5T0U0 273 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 HEATR3Q7Z4Q2 680 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 CCDC47Q96A33 483 aaKnown RBP12.6□□□□□ -0.39
NEFM-201ENST00000221166 MCM9Q9NXL9 1143 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 TFR2Q9UP52 801 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 ABL1P00519 1130 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 MATR3P43243 847 aaKnown RBP eCLIP12.6□□□□□ -0.39
NEFM-201ENST00000221166 MTIF2P46199 727 aaKnown RBP12.6□□□□□ -0.39
NEFM-201ENST00000221166 STX8Q9UNK0 236 aa12.6□□□□□ -0.39
NEFM-201ENST00000221166 CCDC151A5D8V7 595 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 PRPF3O43395 683 aaKnown RBP12.59□□□□□ -0.39
NEFM-201ENST00000221166 ZMYND10O75800 440 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 GYPCP04921 128 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 CALM1P0DP23 149 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 CALM2P0DP24 149 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 CALM3P0DP25 149 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 IL6STP40189 918 aaPredicted RBP12.59□□□□□ -0.39
NEFM-201ENST00000221166 USP5P45974 858 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 PIP4K2BP78356 416 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 C10orf67Q8IYJ2 551 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 TRIM34Q9BYJ4 488 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 JADE2Q9NQC1 790 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 TRIM10Q9UDY6 481 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 ADAM21Q9UKJ8 722 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 ATP8B1O43520 1251 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 ADAMTS2O95450 1211 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 RPN1P04843 607 aaKnown RBP12.59□□□□□ -0.39
NEFM-201ENST00000221166 CYP2D6P10635 497 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 DPYDQ12882 1025 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 CHP1Q99653 195 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 GBP3Q9H0R5 595 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 RMND1Q9NWS8 449 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 ARFGEF2Q9Y6D5 1785 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 DTHD1Q6ZMT9 781 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 CRNKL1Q9BZJ0 848 aaKnown RBP12.59□□□□□ -0.39
NEFM-201ENST00000221166 CCDC87Q9NVE4 849 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 EPN1Q9Y6I3 576 aaPredicted RBP12.59□□□□□ -0.39
NEFM-201ENST00000221166 LAMA4Q16363 1823 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 MACROD2A1Z1Q3 448 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 SCG2P13521 617 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 KCNQ4P56696 695 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 RSRC2Q7L4I2 434 aaKnown RBP12.59□□□□□ -0.39
NEFM-201ENST00000221166 PHF20Q9BVI0 1012 aa12.59□□□□□ -0.39
NEFM-201ENST00000221166 FUT8Q9BYC5 575 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms