RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 METTL14Q9HCE5 456 aaKnown RBP4.89□□□□□ -1.63
CHD9-201ENST00000219084 ARHGEF10LQ9HCE6 1279 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 RABGAP1Q9Y3P9 1069 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 ZNF521Q96K83 1311 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 CCDC169A6NNP5 214 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 ERVV-2B6SEH9 535 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 CASQ2O14958 399 aaPredicted RBP4.89□□□□□ -1.63
CHD9-201ENST00000219084 RFC4P35249 363 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 ZC3H6P61129 1189 aaKnown RBP4.89□□□□□ -1.63
CHD9-201ENST00000219084 TSHZ3Q63HK5 1081 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 TPTE2Q6XPS3 522 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 GSDMAQ96QA5 445 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 HAUS7Q99871 368 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 PAIP2Q9BPZ3 127 aaKnown RBP4.89□□□□□ -1.63
CHD9-201ENST00000219084 VCX3AQ9NNX9 186 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 TBX22Q9Y458 520 aa4.89□□□□□ -1.63
CHD9-201ENST00000219084 CCNT1O60563 726 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 MAP2K2P36507 400 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 DNA2P51530 1060 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 CALCRLQ16602 461 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 TRIM42Q8IWZ5 723 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 PANX2Q96RD6 677 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 ZBTB3Q9H5J0 574 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 PUF60Q9UHX1 559 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 DIS3Q9Y2L1 958 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 LMTK2Q8IWU2 1503 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 TRAF5O00463 557 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 VIMP08670 466 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 EIF3BP55884 814 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 ETF1P62495 437 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 ITIH3Q06033 890 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 GLE1Q53GS7 698 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 RAB11FIP4Q86YS3 637 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 WHAMMQ8TF30 809 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD9-201ENST00000219084 PDE8AO60658 829 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 PRPF6O94906 941 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 EEF2P13639 858 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 TNNI2P48788 182 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 CC2D2BQ6DHV5 1058 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 ZNF790Q6PG37 636 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 ZNF365Q70YC5 407 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 IPO4Q8TEX9 1081 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 BCL2L12Q9HB09 334 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 AMFRQ9UKV5 643 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 TPCN1Q9ULQ1 816 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 NFE2L3Q9Y4A8 694 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 CLTCQ00610 1675 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 GTPBP6O43824 516 aaPredicted RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 TROVE2P10155 538 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD9-201ENST00000219084 LMNB1P20700 586 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 DEUP1Q05D60 604 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 NAA25Q14CX7 972 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 HSP90AA5PQ58FG0 334 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 OGFOD1Q8N543 542 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 TBC1D31Q96DN5 1066 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 EFCC1Q9HA90 598 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 DAAM1Q9Y4D1 1078 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 COMMD10Q9Y6G5 202 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 KCNJ18B7U540 433 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 SPOPO43791 374 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 TNFAIP3P21580 790 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 PCK1P35558 622 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 CUL1Q13616 776 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 KCNJ12Q14500 433 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 PEX26Q7Z412 305 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 VPS52Q8N1B4 723 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 USHBP1Q8N6Y0 703 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 DHTKD1Q96HY7 919 aaPredicted RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 CABS1Q96KC9 395 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 CAPS2Q9BXY5 557 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 ACTR5Q9H9F9 607 aaPredicted RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.88□□□□□ -1.633e-7■■■□□ 19
CHD9-201ENST00000219084 KLHL14Q9P2G3 628 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 MROH2AA6NES4 1674 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 GPAA1O43292 621 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 ADCY7P51828 1080 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 EPHB4P54760 987 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 PDE4DQ08499 809 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 RBM17Q96I25 401 aaKnown RBP4.88□□□□□ -1.63
CHD9-201ENST00000219084 SLC52A2Q9HAB3 445 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 MYO5BQ9ULV0 1848 aa4.88□□□□□ -1.63
CHD9-201ENST00000219084 SART1O43290 800 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 CCT6AP40227 531 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 RAPGEF1Q13905 1077 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 KARSQ15046 597 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 REXO1Q8N1G1 1221 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 LSM14AQ8ND56 463 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 GDAP1L1Q96MZ0 367 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 MCM9Q9NXL9 1143 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 PPP2R2CQ9Y2T4 447 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.87□□□□□ -1.63
CHD9-201ENST00000219084 INO80Q9ULG1 1556 aaPredicted RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 IRS4O14654 1257 aaPredicted RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 IGSF3O75054 1194 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 KCNJ6P48051 423 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 CLNS1AP54105 237 aaKnown RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 CDC37Q16543 378 aaPredicted RBP4.87□□□□□ -1.63
CHD9-201ENST00000219084 SPATA1Q5VX52 437 aa4.87□□□□□ -1.63
CHD9-201ENST00000219084 ISM2Q6H9L7 571 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms