RNA–Protein interactions for RNA: ENST00000218867.3

SGCG-201, Transcript of sarcoglycan gamma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCG, Length 1,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCG-201ENST00000218867 SH3D19Q5HYK7 790 aa12.49□□□□□ -0.41
SGCG-201ENST00000218867 PRRT2Q7Z6L0 340 aaPredicted RBP12.49□□□□□ -0.41
SGCG-201ENST00000218867 ANKRD23Q86SG2 305 aa12.49□□□□□ -0.41
SGCG-201ENST00000218867 CEP95Q96GE4 821 aa12.49□□□□□ -0.41
SGCG-201ENST00000218867 C22orf23Q9BZE7 217 aa12.49□□□□□ -0.41
SGCG-201ENST00000218867 HOXC10Q9NYD6 342 aa12.49□□□□□ -0.41
SGCG-201ENST00000218867 USP17L15C9J2P7 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L13C9JLJ4 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L11C9JVI0 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L18D6R9N7 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L22D6RA61 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L17D6RBQ6 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L19D6RCP7 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L20D6RJB6 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 PRC1O43663 620 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 HMGCS2P54868 508 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 IRX3P78415 501 aaPredicted RBP12.48□□□□□ -0.41
SGCG-201ENST00000218867 USP17L24Q0WX57 530 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 ARHGEF6Q15052 776 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 GMCL1P1Q8NEA9 526 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 PARK7Q99497 189 aaKnown RBP12.48□□□□□ -0.41
SGCG-201ENST00000218867 VCPKMTQ9H867 229 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 ZFYVE28Q9HCC9 887 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 PNMA2Q9UL42 364 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 MYH1P12882 1939 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 TESPA1A2RU30 521 aaPredicted RBP12.48□□□□□ -0.41
SGCG-201ENST00000218867 WDR46O15213 610 aaKnown RBP12.48□□□□□ -0.41
SGCG-201ENST00000218867 FDX1P10109 184 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 CASTP20810 708 aaKnown RBP12.48□□□□□ -0.41
SGCG-201ENST00000218867 KIF5BP33176 963 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 SLC1A4P43007 532 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 RRP1BQ14684 758 aaKnown RBP12.48□□□□□ -0.41
SGCG-201ENST00000218867 PPP2R5BQ15173 497 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 ANKS1AQ92625 1134 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 C12orf42Q96LP6 360 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 AGTPBP1Q9UPW5 1226 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 SNX14Q9Y5W7 946 aa12.48□□□□□ -0.41
SGCG-201ENST00000218867 TRPM7Q96QT4 1865 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 TNKSO95271 1327 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 NEDD4P46934 1319 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 NAV1Q8NEY1 1877 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 FAM155AB1AL88 458 aaPredicted RBP12.47□□□□□ -0.41
SGCG-201ENST00000218867 F5H6K3 240 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 LIFRP42702 1097 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 GNAQP50148 359 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 KLRC3Q07444 240 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 TRAF1Q13077 416 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 IKQ13123 557 aaPredicted RBP12.47□□□□□ -0.41
SGCG-201ENST00000218867 GPATCH4Q5T3I0 446 aaKnown RBP12.47□□□□□ -0.41
SGCG-201ENST00000218867 SLFN13Q68D06 897 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 IFNL1Q8IU54 200 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 SMCR8Q8TEV9 937 aaPredicted RBP12.47□□□□□ -0.41
SGCG-201ENST00000218867 DCAF4Q8WV16 495 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 SLC12A7Q9Y666 1083 aa12.47□□□□□ -0.41
SGCG-201ENST00000218867 CCDC196A0A1B0GTZ2 297 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 SLURP2P0DP57 97 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 BMP3P12645 472 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 HOXA7P31268 230 aaPredicted RBP12.46□□□□□ -0.41
SGCG-201ENST00000218867 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 COG2Q14746 738 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 ZYXQ15942 572 aaKnown RBP12.46□□□□□ -0.41
SGCG-201ENST00000218867 RUFY3Q7L099 469 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 CCAR1Q8IX12 1150 aaKnown RBP12.46□□□□□ -0.41
SGCG-201ENST00000218867 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
SGCG-201ENST00000218867 CTCFLQ8NI51 663 aaPredicted RBP12.46□□□□□ -0.41
SGCG-201ENST00000218867 MS4A4AQ96JQ5 239 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 ZKSCAN3Q9BRR0 538 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 TANGO6Q9C0B7 1094 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 NBPF3Q9H094 633 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 SAGE1Q9NXZ1 904 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 FEM1BQ9UK73 627 aa12.46□□□□□ -0.41
SGCG-201ENST00000218867 PDHXO00330 501 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 ST18O60284 1047 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 GCLCP48506 637 aaPredicted RBP12.45□□□□□ -0.42
SGCG-201ENST00000218867 EVX2Q03828 476 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 TAF1CQ15572 869 aaPredicted RBP12.45□□□□□ -0.42
SGCG-201ENST00000218867 PNMA1Q8ND90 353 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 ACER1Q8TDN7 264 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 GMCL1Q96IK5 515 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 TMEM47Q9BQJ4 181 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 LZTS2Q9BRK4 669 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 ZSWIM6Q9HCJ5 1215 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 IL17RBQ9NRM6 502 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 PDRG1Q9NUG6 133 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 FOCADQ5VW36 1801 aa12.45□□□□□ -0.42
SGCG-201ENST00000218867 SMIM22K7EJ46 135 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 AOC2O75106 756 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 PARP1P09874 1014 aaKnown RBP12.44□□□□□ -0.42
SGCG-201ENST00000218867 RPS6KB1P23443 525 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 NOVP48745 357 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 RCAN1P53805 252 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 CCNA1P78396 465 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 HTRA3P83110 453 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 KIF22Q14807 665 aa12.44□□□□□ -0.42
SGCG-201ENST00000218867 RABEP1Q15276 862 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms