RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 GTPBP4Q9BZE4 634 aaKnown RBP11□□□□□ -0.65
CSTF1-201ENST00000217109 OSBPL5Q9H0X9 879 aaPredicted RBP11□□□□□ -0.65
CSTF1-201ENST00000217109 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 CPDO75976 1380 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 PARP1P09874 1014 aaKnown RBP11□□□□□ -0.65
CSTF1-201ENST00000217109 CASP14P31944 242 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 LMAN1P49257 510 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 MECOMQ03112 1051 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 CCDC40Q4G0X9 1142 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 TRAPPC3LQ5T215 181 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 FBXO38Q6PIJ6 1188 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 TRMT1LQ7Z2T5 733 aaKnown RBP11□□□□□ -0.65
CSTF1-201ENST00000217109 CSGALNACT2Q8N6G5 542 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 SLFN14P0C7P3 912 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 ZNF76P36508 570 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 ALX1Q15699 326 aa11□□□□□ -0.65
CSTF1-201ENST00000217109 E4F1Q66K89 784 aaPredicted RBP11□□□□□ -0.65
CSTF1-201ENST00000217109 GPR101Q96P66 508 aaPredicted RBP11□□□□□ -0.65
CSTF1-201ENST00000217109 WDR19Q8NEZ3 1342 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 ARID5AQ03989 594 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 CCDC122Q5T0U0 273 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 SLF2Q8IX21 1173 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 MINPP1Q9UNW1 487 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 ZNF804BA4D1E1 1349 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 MYO1BO43795 1136 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 GNA11P29992 359 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 CHMP4BP1P59074 171 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 DYMQ7RTS9 669 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 TRIML1Q8N9V2 468 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 WDR66Q8TBY9 1149 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 ENOX1Q8TC92 643 aaKnown RBP10.99□□□□□ -0.65
CSTF1-201ENST00000217109 CRACR2AQ9BSW2 395 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.99□□□□□ -0.65
CSTF1-201ENST00000217109 MST1RQ04912 1400 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 SOWAHDA6NJG2 315 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 STX10O60499 249 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 USO1O60763 962 aaKnown RBP10.99□□□□□ -0.65
CSTF1-201ENST00000217109 RBL2Q08999 1139 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 ZNF34Q8IZ26 560 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 CCDC43Q96MW1 224 aaKnown RBP10.99□□□□□ -0.65
CSTF1-201ENST00000217109 CPVLQ9H3G5 476 aa10.99□□□□□ -0.65
CSTF1-201ENST00000217109 ARPP21Q9UBL0 812 aaPredicted RBP10.99□□□□□ -0.65
CSTF1-201ENST00000217109 MACROD2A1Z1Q3 448 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 PAGE5Q96GU1 130 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 CCDC42Q96M95 316 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 TSG101Q99816 390 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 GBP3Q9H0R5 595 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 TCEAL9Q9UHQ7 104 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 NFAT5O94916 1531 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 USP17L3A6NCW0 530 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 USP17L4A6NCW7 530 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 UBAP1LF5GYI3 381 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 CYLC1P35663 651 aaPredicted RBP10.98□□□□□ -0.65
CSTF1-201ENST00000217109 MAPK8IP2Q13387 824 aaPredicted RBP10.98□□□□□ -0.65
CSTF1-201ENST00000217109 MORC3Q14149 939 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 USP17L1Q7RTZ2 530 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 NWD1Q149M9 1564 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 KCNJ18B7U540 433 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 KLRF2D3W0D1 207 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 SEC31AO94979 1220 aaKnown RBP10.98□□□□□ -0.65
CSTF1-201ENST00000217109 KCNJ12Q14500 433 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 TCERG1LQ5VWI1 586 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 FAM114A1Q8IWE2 563 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 CEP112Q8N8E3 955 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 EPC1Q9H2F5 836 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 BIN2Q9UBW5 565 aaPredicted RBP10.98□□□□□ -0.65
CSTF1-201ENST00000217109 TEX33O43247 280 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 ST5P78524 1137 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 GSDMAQ96QA5 445 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
CSTF1-201ENST00000217109 CENPHQ9H3R5 247 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 ATP8A2Q9NTI2 1148 aa10.98□□□□□ -0.65
CSTF1-201ENST00000217109 PRPF3O43395 683 aaKnown RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 ERCC5P28715 1186 aaPredicted RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 TECP42680 631 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 FMR1Q06787 632 aaKnown RBP eCLIP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 EYA3Q99504 573 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 ZC3H12CQ9C0D7 883 aaKnown RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 ABCC12Q96J65 1359 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 SMCO2A6NFE2 343 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 RAD51AP2Q09MP3 1159 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 KRT79Q5XKE5 535 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 TOGARAM2Q6ZUX3 1019 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 BPIFA3Q9BQP9 254 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 BSDC1Q9NW68 430 aaPredicted RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 CACNA1FO60840 1977 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 DDAH1O94760 285 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 RPN1P04843 607 aaKnown RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 KMT5BQ4FZB7 885 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 CYP26C1Q6V0L0 522 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 CABP7Q86V35 215 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 TMTC1Q8IUR5 882 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 SLC44A5Q8NCS7 719 aa10.97□□□□□ -0.65
CSTF1-201ENST00000217109 FAM84BQ96KN1 310 aaPredicted RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 LUC7LQ9NQ29 371 aaKnown RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 CWC15Q9P013 229 aaKnown RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 FBXO2Q9UK22 296 aaPredicted RBP10.97□□□□□ -0.65
CSTF1-201ENST00000217109 WTIPA6NIX2 430 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms