RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 NIP7Q9Y221 180 aaKnown RBP eCLIP15.1■□□□□ 0.01
SRP54-201ENST00000216774 WNK3Q9BYP7 1800 aa15.1■□□□□ 0.01
SRP54-201ENST00000216774 COL1A1P02452 1464 aaPredicted RBP15.1■□□□□ 0.01
SRP54-201ENST00000216774 CCDC66A2RUB6 948 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 MTF1Q14872 753 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 KARSQ15046 597 aaKnown RBP15.09■□□□□ 0.01
SRP54-201ENST00000216774 RASGRP2Q7LDG7 609 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 UBXN6Q9BZV1 441 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 KIF5CO60282 957 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 TUBB4BP68371 445 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 E2F4Q16254 413 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 RAD9BQ6WBX8 426 aa15.09■□□□□ 0.01
SRP54-201ENST00000216774 IQSEC3Q9UPP2 1182 aaPredicted RBP15.09■□□□□ 0.01
SRP54-201ENST00000216774 CNTNAP5Q8WYK1 1306 aa15.08■□□□□ 0.01
SRP54-201ENST00000216774 LRRC10BA6NIK2 292 aa15.08■□□□□ 0
SRP54-201ENST00000216774 WNT7AO00755 349 aa15.08■□□□□ 0
SRP54-201ENST00000216774 TBC1D8O95759 1140 aa15.08■□□□□ 0
SRP54-201ENST00000216774 ATP6V1AP38606 617 aa15.08■□□□□ 0
SRP54-201ENST00000216774 TXLNAP40222 546 aa15.08■□□□□ 0
SRP54-201ENST00000216774 GYG1P46976 350 aa15.08■□□□□ 0
SRP54-201ENST00000216774 STX17P56962 302 aa15.08■□□□□ 0
SRP54-201ENST00000216774 SPAG1Q07617 926 aa15.08■□□□□ 0
SRP54-201ENST00000216774 PTGDRQ13258 359 aa15.08■□□□□ 0
SRP54-201ENST00000216774 ZNF174Q15697 407 aa15.08■□□□□ 0
SRP54-201ENST00000216774 CAVIN4Q5BKX8 364 aa15.08■□□□□ 0
SRP54-201ENST00000216774 TEX35Q5T0J7 233 aa15.08■□□□□ 0
SRP54-201ENST00000216774 ARFGAP3Q9NP61 516 aa15.08■□□□□ 0
SRP54-201ENST00000216774 LIMA1Q9UHB6 759 aaKnown RBP15.08■□□□□ 0
SRP54-201ENST00000216774 ZNF335Q9H4Z2 1342 aaPredicted RBP15.08■□□□□ 0
SRP54-201ENST00000216774 hCG_1642624A0A1W2PR95 340 aa15.08■□□□□ 0
SRP54-201ENST00000216774 SMIM22K7EJ46 135 aa15.08■□□□□ 0
SRP54-201ENST00000216774 ORC4O43929 436 aa15.08■□□□□ 0
SRP54-201ENST00000216774 CTR9Q6PD62 1173 aa15.08■□□□□ 0
SRP54-201ENST00000216774 ANKRD18AQ8IVF6 992 aa15.08■□□□□ 0
SRP54-201ENST00000216774 CTCFLQ8NI51 663 aaPredicted RBP15.08■□□□□ 0
SRP54-201ENST00000216774 CDCA7Q9BWT1 371 aaPredicted RBP15.08■□□□□ 0
SRP54-201ENST00000216774 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
SRP54-201ENST00000216774 RWDD2AQ9UIY3 292 aa15.08■□□□□ 0
SRP54-201ENST00000216774 ZNF652Q9Y2D9 606 aa15.08■□□□□ 0
SRP54-201ENST00000216774 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.08■□□□□ 0
SRP54-201ENST00000216774 MYH2Q9UKX2 1941 aa15.07■□□□□ 0
SRP54-201ENST00000216774 XDHP47989 1333 aa15.07■□□□□ 0
SRP54-201ENST00000216774 A0A1B0GUL6 1792 aa15.07■□□□□ 0
SRP54-201ENST00000216774 GYPCP04921 128 aa15.07■□□□□ 0
SRP54-201ENST00000216774 CASP1P29466 404 aa15.07■□□□□ 0
SRP54-201ENST00000216774 TRIM14Q14142 442 aa15.07■□□□□ 0
SRP54-201ENST00000216774 PDXDC2PQ6P474 469 aa15.07■□□□□ 0
SRP54-201ENST00000216774 TMED8Q6PL24 325 aaPredicted RBP15.07■□□□□ 0
SRP54-201ENST00000216774 SRGAP1Q7Z6B7 1085 aa15.07■□□□□ 0
SRP54-201ENST00000216774 LZTFL1Q9NQ48 299 aa15.07■□□□□ 0
SRP54-201ENST00000216774 BSDC1Q9NW68 430 aaPredicted RBP15.07■□□□□ 0
SRP54-201ENST00000216774 TTF2Q9UNY4 1162 aaKnown RBP15.07■□□□□ 0
SRP54-201ENST00000216774 CTNND2Q9UQB3 1225 aa15.07■□□□□ 0
SRP54-201ENST00000216774 SCN7AQ01118 1682 aa15.07■□□□□ 0
SRP54-201ENST00000216774 KAT6BQ8WYB5 2073 aa15.07■□□□□ 0
SRP54-201ENST00000216774 CYP2D7A0A087X1C5 515 aa15.06■□□□□ 0
SRP54-201ENST00000216774 GTPBP6O43824 516 aaPredicted RBP15.06■□□□□ 0
SRP54-201ENST00000216774 SEC31AO94979 1220 aaKnown RBP15.06■□□□□ 0
SRP54-201ENST00000216774 CASP14P31944 242 aa15.06■□□□□ 0
SRP54-201ENST00000216774 CYP2C19P33261 490 aa15.06■□□□□ 0
SRP54-201ENST00000216774 DYNLL1P63167 89 aaKnown RBP15.06■□□□□ 0
SRP54-201ENST00000216774 TMTC1Q8IUR5 882 aa15.06■□□□□ 0
SRP54-201ENST00000216774 SMYD4Q8IYR2 804 aaPredicted RBP15.06■□□□□ 0
SRP54-201ENST00000216774 CEP112Q8N8E3 955 aa15.06■□□□□ 0
SRP54-201ENST00000216774 RMND1Q9NWS8 449 aa15.06■□□□□ 0
SRP54-201ENST00000216774 STRCQ7RTU9 1775 aa15.06■□□□□ 0
SRP54-201ENST00000216774 COL4A1P02462 1669 aa15.06■□□□□ 0
SRP54-201ENST00000216774 LOC102724428A0A0B4J2F2 783 aa15.06■□□□□ 0
SRP54-201ENST00000216774 CCDC151A5D8V7 595 aa15.06■□□□□ 0
SRP54-201ENST00000216774 SCG2P13521 617 aa15.06■□□□□ 0
SRP54-201ENST00000216774 SIK1P57059 783 aa15.06■□□□□ 0
SRP54-201ENST00000216774 CHMP4BP1P59074 171 aa15.06■□□□□ 0
SRP54-201ENST00000216774 BRD3Q15059 726 aa15.06■□□□□ 0
SRP54-201ENST00000216774 SF3B3Q15393 1217 aaKnown RBP15.06■□□□□ 0
SRP54-201ENST00000216774 ARL6IP4Q66PJ3 421 aaKnown RBP15.06■□□□□ 0
SRP54-201ENST00000216774 SRBD1Q8N5C6 995 aaKnown RBP15.06■□□□□ 0
SRP54-201ENST00000216774 ANKRD20A12PQ8NF67 263 aa15.06■□□□□ 0
SRP54-201ENST00000216774 CPLX3Q8WVH0 158 aa15.06■□□□□ 0
SRP54-201ENST00000216774 CDC23Q9UJX2 597 aa15.06■□□□□ 0
SRP54-201ENST00000216774 PDS5AQ29RF7 1337 aaKnown RBP15.06■□□□□ 0
SRP54-201ENST00000216774 POTEB2H3BUK9 544 aa15.05■□□□□ 0
SRP54-201ENST00000216774 PAK1Q13153 545 aa15.05■□□□□ 0
SRP54-201ENST00000216774 KRT31Q15323 416 aa15.05■□□□□ 0
SRP54-201ENST00000216774 NOM1Q5C9Z4 860 aaKnown RBP15.05■□□□□ 0
SRP54-201ENST00000216774 IRX2Q9BZI1 471 aaPredicted RBP15.05■□□□□ 0
SRP54-201ENST00000216774 EPC1Q9H2F5 836 aa15.05■□□□□ 0
SRP54-201ENST00000216774 BAZ2AQ9UIF9 1905 aaKnown RBP15.05■□□□□ 0
SRP54-201ENST00000216774 USP17L12C9JPN9 530 aa15.05■□□□□ -0
SRP54-201ENST00000216774 USP17L21D6R901 530 aa15.05■□□□□ -0
SRP54-201ENST00000216774 SASH3O75995 380 aa15.05■□□□□ -0
SRP54-201ENST00000216774 FXR1P51114 621 aaKnown RBP eCLIP15.05■□□□□ -0
SRP54-201ENST00000216774 PFKFB3Q16875 520 aaPredicted RBP15.05■□□□□ -0
SRP54-201ENST00000216774 ZNF658Q5TYW1 1059 aaPredicted RBP15.05■□□□□ -0
SRP54-201ENST00000216774 RRAGBQ5VZM2 374 aa15.05■□□□□ -0
SRP54-201ENST00000216774 CLEC4GQ6UXB4 293 aa15.05■□□□□ -0
SRP54-201ENST00000216774 ZNF384Q8TF68 577 aa15.05■□□□□ -0
SRP54-201ENST00000216774 MYO1AQ9UBC5 1043 aa15.05■□□□□ -0
SRP54-201ENST00000216774 N4BP3O15049 544 aa15.04■□□□□ -0
SRP54-201ENST00000216774 CALML3P27482 149 aa15.04■□□□□ -0
SRP54-201ENST00000216774 LONP1P36776 959 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms