RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 GABPAQ06546 454 aa34.06■■■■□ 3.04
PABPN1-201ENST00000216727 EARS2Q5JPH6 523 aaKnown RBP34.06■■■■□ 3.04
PABPN1-201ENST00000216727 CNKSR1Q969H4 720 aa34.06■■■■□ 3.04
PABPN1-201ENST00000216727 MXD3Q9BW11 206 aa34.06■■■■□ 3.04
PABPN1-201ENST00000216727 BAZ2BQ9UIF8 2168 aaKnown RBP34.06■■■■□ 3.04
PABPN1-201ENST00000216727 PLIN4Q96Q06 1357 aa34.06■■■■□ 3.04
PABPN1-201ENST00000216727 FAM205CA6NFA0 338 aa34.05■■■■□ 3.04
PABPN1-201ENST00000216727 GOLGA6L19H0YKK7 550 aa34.05■■■■□ 3.04
PABPN1-201ENST00000216727 CALML3P27482 149 aa34.05■■■■□ 3.04
PABPN1-201ENST00000216727 NLRP5P59047 1200 aa34.05■■■■□ 3.04
PABPN1-201ENST00000216727 ZRSR1Q15695 479 aaKnown RBP34.05■■■■□ 3.04
PABPN1-201ENST00000216727 POTEAQ6S8J7 498 aa34.05■■■■□ 3.04
PABPN1-201ENST00000216727 TEKT1Q969V4 418 aa34.05■■■■□ 3.04
PABPN1-201ENST00000216727 MRIQ9BWK5 157 aa34.05■■■■□ 3.04
PABPN1-201ENST00000216727 USP40Q9NVE5 1235 aa34.04■■■■□ 3.04
PABPN1-201ENST00000216727 FAM13BQ9NYF5 915 aa34.04■■■■□ 3.04
PABPN1-201ENST00000216727 SLX4Q8IY92 1834 aa34.04■■■■□ 3.04
PABPN1-201ENST00000216727 ZNF500O60304 480 aaPredicted RBP34.04■■■■□ 3.04
PABPN1-201ENST00000216727 EN1Q05925 392 aaPredicted RBP34.04■■■■□ 3.04
PABPN1-201ENST00000216727 FAM177A1Q8N128 213 aaPredicted RBP34.04■■■■□ 3.04
PABPN1-201ENST00000216727 BPIFA3Q9BQP9 254 aa34.04■■■■□ 3.04
PABPN1-201ENST00000216727 TUBE1Q9UJT0 475 aa34.04■■■■□ 3.04
PABPN1-201ENST00000216727 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP34.03■■■■□ 3.04
PABPN1-201ENST00000216727 TRAPPC10P48553 1259 aa34.03■■■■□ 3.04
PABPN1-201ENST00000216727 PICALMQ13492 652 aa34.03■■■■□ 3.04
PABPN1-201ENST00000216727 DDX4Q9NQI0 724 aaKnown RBP34.03■■■■□ 3.04
PABPN1-201ENST00000216727 TOP1P11387 765 aaKnown RBP34.03■■■■□ 3.04
PABPN1-201ENST00000216727 ATP2B1P20020 1258 aa34.03■■■■□ 3.04
PABPN1-201ENST00000216727 STRIP1Q5VSL9 837 aa34.03■■■■□ 3.04
PABPN1-201ENST00000216727 APOBEC3HQ6NTF7 200 aaKnown RBP34.03■■■■□ 3.04
PABPN1-201ENST00000216727 PLA2G4DQ86XP0 818 aa34.03■■■■□ 3.04
PABPN1-201ENST00000216727 DHX40Q8IX18 779 aaKnown RBP34.03■■■■□ 3.04
PABPN1-201ENST00000216727 DBNDD1Q9H9R9 158 aa34.03■■■■□ 3.04
PABPN1-201ENST00000216727 VEGFAP15692 232 aaPredicted RBP34.02■■■■□ 3.04
PABPN1-201ENST00000216727 NLRP12P59046 1061 aa34.02■■■■□ 3.04
PABPN1-201ENST00000216727 SARM1Q6SZW1 724 aa34.02■■■■□ 3.04
PABPN1-201ENST00000216727 KRBA2Q6ZNG9 492 aa34.02■■■■□ 3.04
PABPN1-201ENST00000216727 CEP95Q96GE4 821 aa34.02■■■■□ 3.04
PABPN1-201ENST00000216727 BECN2A8MW95 431 aa34.01■■■■□ 3.04
PABPN1-201ENST00000216727 SCNN1DP51172 638 aa34.01■■■■□ 3.04
PABPN1-201ENST00000216727 GRIN1Q05586 938 aa34.01■■■■□ 3.04
PABPN1-201ENST00000216727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP34.01■■■■□ 3.04
PABPN1-201ENST00000216727 MYO3BQ8WXR4 1341 aa34.01■■■■□ 3.03
PABPN1-201ENST00000216727 A0A087WWV3 80 aa34.01■■■■□ 3.03
PABPN1-201ENST00000216727 LONRF3Q496Y0 759 aa34.01■■■■□ 3.03
PABPN1-201ENST00000216727 CDC42EP5Q6NZY7 148 aa34.01■■■■□ 3.03
PABPN1-201ENST00000216727 C7orf43Q8WVR3 580 aa34.01■■■■□ 3.03
PABPN1-201ENST00000216727 CYTH3O43739 400 aa34■■■■□ 3.03
PABPN1-201ENST00000216727 CHRNA5P30532 468 aa34■■■■□ 3.03
PABPN1-201ENST00000216727 SLC35G1Q2M3R5 365 aa34■■■■□ 3.03
PABPN1-201ENST00000216727 ARHGAP30Q7Z6I6 1101 aaPredicted RBP34■■■■□ 3.03
PABPN1-201ENST00000216727 PIBF1Q8WXW3 757 aa34■■■■□ 3.03
PABPN1-201ENST00000216727 SPZ1Q9BXG8 430 aa34■■■■□ 3.03
PABPN1-201ENST00000216727 SWAP70Q9UH65 585 aa34■■■■□ 3.03
PABPN1-201ENST00000216727 TPM3P06753 285 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 ZNF75DP51815 510 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 CNNM3Q8NE01 707 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 FERMT2Q96AC1 680 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 ZDHHC15Q96MV8 337 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 OSBPL5Q9H0X9 879 aaPredicted RBP33.99■■■■□ 3.03
PABPN1-201ENST00000216727 GOLGA6L6A8MZA4 724 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 SMARCA1P28370 1054 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 DPCR1Q3MIW9 517 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 TTC38Q5R3I4 469 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 TRIM5Q9C035 493 aa33.99■■■■□ 3.03
PABPN1-201ENST00000216727 CRKP46108 304 aa33.98■■■■□ 3.03
PABPN1-201ENST00000216727 HDLBPQ00341 1268 aaKnown RBP33.98■■■■□ 3.03
PABPN1-201ENST00000216727 CC2D2BQ6DHV5 1058 aa33.98■■■■□ 3.03
PABPN1-201ENST00000216727 GALNT17Q6IS24 598 aa33.98■■■■□ 3.03
PABPN1-201ENST00000216727 KLRF2D3W0D1 207 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 PARP1P09874 1014 aaKnown RBP33.97■■■■□ 3.03
PABPN1-201ENST00000216727 SPECC1Q5M775 1068 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 DACT2Q5SW24 774 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 BLIDQ8IZY5 108 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 KCNQ5Q9NR82 932 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 SERPINB13Q9UIV8 391 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 PCDHA4Q9UN74 947 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 ECE2O60344 883 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 NOM1Q5C9Z4 860 aaKnown RBP33.97■■■■□ 3.03
PABPN1-201ENST00000216727 METTL16Q86W50 562 aaKnown RBP33.97■■■■□ 3.03
PABPN1-201ENST00000216727 CCDC148Q8NFR7 591 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 CSRNP2Q9H175 543 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 HOOK1Q9UJC3 728 aaKnown RBP33.97■■■■□ 3.03
PABPN1-201ENST00000216727 ADAMTSL1Q8N6G6 1762 aa33.97■■■■□ 3.03
PABPN1-201ENST00000216727 DAGLBQ8NCG7 672 aa33.96■■■■□ 3.03
PABPN1-201ENST00000216727 GPKOWQ92917 476 aaPredicted RBP eCLIP33.96■■■■□ 3.032e-8■□□□□ 11
PABPN1-201ENST00000216727 BARHL2Q9NY43 387 aa33.96■■■■□ 3.03
PABPN1-201ENST00000216727 MTMR4Q9NYA4 1195 aa33.96■■■■□ 3.03
PABPN1-201ENST00000216727 C10orf71Q711Q0 1435 aa33.95■■■■□ 3.03
PABPN1-201ENST00000216727 IGKV6D-41A0A0C4DH26 115 aa33.95■■■■□ 3.03
PABPN1-201ENST00000216727 PIK3AP1Q6ZUJ8 805 aa33.95■■■■□ 3.03
PABPN1-201ENST00000216727 WNT7AO00755 349 aa33.94■■■■□ 3.02
PABPN1-201ENST00000216727 CDC25BP30305 580 aa33.94■■■■□ 3.02
PABPN1-201ENST00000216727 ATP2C1P98194 919 aaPredicted RBP33.94■■■■□ 3.02
PABPN1-201ENST00000216727 MDM2Q00987 491 aaPredicted RBP33.94■■■■□ 3.02
PABPN1-201ENST00000216727 WWC2Q6AWC2 1192 aa33.94■■■■□ 3.02
PABPN1-201ENST00000216727 AOPEPQ8N6M6 819 aa33.94■■■■□ 3.02
PABPN1-201ENST00000216727 ZNF646O15015 1829 aaPredicted RBP33.94■■■■□ 3.02
PABPN1-201ENST00000216727 M0R2N6 131 aa33.94■■■■□ 3.02
PABPN1-201ENST00000216727 PNOCQ13519 176 aa33.94■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms