RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 PNMA2Q9UL42 364 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 FAM196BA6NMK8 535 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 EAF2Q96CJ1 260 aaPredicted RBP15.42■□□□□ 0.06
SIX4-201ENST00000216513 PCDHA1Q9Y5I3 950 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 C8orf34Q49A92 452 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 KANSL2Q9H9L4 492 aa15.42■□□□□ 0.06
SIX4-201ENST00000216513 SCAF8Q9UPN6 1271 aaKnown RBP15.42■□□□□ 0.06
SIX4-201ENST00000216513 ZBTB12Q9Y330 459 aaPredicted RBP15.42■□□□□ 0.06
SIX4-201ENST00000216513 ATP2C2O75185 946 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 STAT2P52630 851 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 ZBTB8OSQ8IWT0 167 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 KCNJ14Q9UNX9 436 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 RNF17Q9BXT8 1623 aaKnown RBP15.41■□□□□ 0.06
SIX4-201ENST00000216513 RPS6KB1P23443 525 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 MFSD14CQ5VZR4 134 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 KIAA1841Q6NSI8 718 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 PLA2G4DQ86XP0 818 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 LRWD1Q9UFC0 647 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 KCNH4Q9UQ05 1017 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 PI16Q6UXB8 463 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 TTLL11Q8NHH1 800 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 DYNLL2Q96FJ2 89 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 LBHD1Q9BQE6 289 aaPredicted RBP15.41■□□□□ 0.06
SIX4-201ENST00000216513 GH2P01242 217 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 ZSCAN22P10073 491 aaPredicted RBP15.41■□□□□ 0.06
SIX4-201ENST00000216513 BMP3P12645 472 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 ZRSR2Q15696 482 aaKnown RBP15.41■□□□□ 0.06
SIX4-201ENST00000216513 ADPGKQ9BRR6 497 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 MINPP1Q9UNW1 487 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 AOPEPQ8N6M6 819 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 GPKOWQ92917 476 aaPredicted RBP eCLIP15.41■□□□□ 0.06
SIX4-201ENST00000216513 MED10Q9BTT4 135 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 UBN2Q6ZU65 1347 aa15.41■□□□□ 0.06
SIX4-201ENST00000216513 IGSF3O75054 1194 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 CALRP27797 417 aaKnown RBP15.4■□□□□ 0.06
SIX4-201ENST00000216513 POLGP54098 1239 aaPredicted RBP15.4■□□□□ 0.06
SIX4-201ENST00000216513 YARSP54577 528 aaKnown RBP15.4■□□□□ 0.06
SIX4-201ENST00000216513 CD209Q9NNX6 404 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 NRBP2Q9NSY0 501 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 ATP8A2Q9NTI2 1148 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 CIAO1O76071 339 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 ZSCAN20P17040 1043 aaPredicted RBP15.4■□□□□ 0.06
SIX4-201ENST00000216513 DDX19AQ9NUU7 478 aaKnown RBP15.4■□□□□ 0.06
SIX4-201ENST00000216513 LMNB1P20700 586 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 SP8Q8IXZ3 490 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 ZNF654Q8IZM8 581 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 KRT9P35527 623 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 ZSCAN30Q86W11 494 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 TTC12Q9H892 705 aaPredicted RBP15.4■□□□□ 0.06
SIX4-201ENST00000216513 SNAP23O00161 211 aa15.4■□□□□ 0.06
SIX4-201ENST00000216513 ASNSP08243 561 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 RPL13P26373 211 aaKnown RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 ARL1P40616 181 aaPredicted RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 ZNF165P49910 485 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 ANGEL2Q5VTE6 544 aaKnown RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 STX1AQ16623 288 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 IQCEQ6IPM2 695 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 DYMQ7RTS9 669 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 PNMA8AQ86V59 439 aaPredicted RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 MRPS27Q92552 414 aaKnown RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 GGA3Q9NZ52 723 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 MAPK8IP1Q9UQF2 711 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 RAPGEF1Q13905 1077 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 TTC38Q5R3I4 469 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 SEPT9Q9UHD8 586 aaPredicted RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 TNKSO95271 1327 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 ARPP19P56211 112 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 PRR5LQ6MZQ0 368 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 DACT1Q9NYF0 836 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 PLA2R1Q13018 1463 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 EPB41P11171 864 aaKnown RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 GMPSP49915 693 aaPredicted RBP15.39■□□□□ 0.05
SIX4-201ENST00000216513 SPP2Q13103 211 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 CHAMP1Q96JM3 812 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 PARP2Q9UGN5 583 aa15.39■□□□□ 0.05
SIX4-201ENST00000216513 E7EWF7 191 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 TRAF5O00463 557 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 TEKT3Q9BXF9 490 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 JADE2Q9NQC1 790 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 CEP170BQ9Y4F5 1589 aaPredicted RBP15.38■□□□□ 0.05
SIX4-201ENST00000216513 KCNA4P22459 653 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 GTF3C6Q969F1 213 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 USP17L5A8MUK1 530 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 STX10O60499 249 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 GCNT3O95395 438 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 CCND2P30279 289 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 ECE1P42892 770 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 PLCD1P51178 756 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 SCARF1Q14162 830 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
SIX4-201ENST00000216513 COL23A1Q86Y22 540 aaPredicted RBP15.38■□□□□ 0.05
SIX4-201ENST00000216513 IQUBQ8NA54 791 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 AMNQ9BXJ7 453 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 TULP4Q9NRJ4 1543 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 LRRIQ4A6NIV6 560 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 KIF5CO60282 957 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 MARK3P27448 753 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 LUZP1Q86V48 1076 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 ZFYVE28Q9HCC9 887 aa15.38■□□□□ 0.05
SIX4-201ENST00000216513 AKR1B10O60218 316 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms