RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 NECAB2Q7Z6G3 386 aa14.34□□□□□ -0.11
SNU13-201ENST00000215956 SLF2Q8IX21 1173 aa14.34□□□□□ -0.11
SNU13-201ENST00000215956 SMCR8Q8TEV9 937 aaPredicted RBP14.34□□□□□ -0.11
SNU13-201ENST00000215956 RNF41Q9H4P4 317 aaPredicted RBP14.34□□□□□ -0.11
SNU13-201ENST00000215956 TAOK2Q9UL54 1235 aa14.34□□□□□ -0.11
SNU13-201ENST00000215956 KIF3AQ9Y496 699 aa14.34□□□□□ -0.11
SNU13-201ENST00000215956 DDX60LQ5H9U9 1706 aaKnown RBP14.34□□□□□ -0.11
SNU13-201ENST00000215956 LAMA2P24043 3122 aaKnown RBP14.34□□□□□ -0.11
SNU13-201ENST00000215956 MYH7P12883 1935 aa14.34□□□□□ -0.11
SNU13-201ENST00000215956 CPA1P15085 419 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 PTPRAP18433 802 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 PDCP20941 246 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 MCM4P33991 863 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 BMP8BP34820 402 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 TDO2P48775 406 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 NT5C2P49902 561 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 GPR153Q6NV75 609 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 Q6ZUG5 572 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 DZIP1Q86YF9 867 aaKnown RBP14.33□□□□□ -0.11
SNU13-201ENST00000215956 ZFPM1Q8IX07 1006 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 IFNL3Q8IZI9 196 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 DIS3LQ8TF46 1054 aaKnown RBP14.33□□□□□ -0.11
SNU13-201ENST00000215956 TNPO1Q92973 898 aaKnown RBP14.33□□□□□ -0.11
SNU13-201ENST00000215956 GDF15Q99988 308 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 NOL10Q9BSC4 688 aaKnown RBP14.33□□□□□ -0.11
SNU13-201ENST00000215956 USP40Q9NVE5 1235 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 AFG3L2Q9Y4W6 797 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 SLC4A4Q9Y6R1 1079 aa14.33□□□□□ -0.11
SNU13-201ENST00000215956 PCP11498 1178 aaKnown RBP14.33□□□□□ -0.12
SNU13-201ENST00000215956 EXOSC10Q01780 885 aaKnown RBP14.33□□□□□ -0.12
SNU13-201ENST00000215956 TOB2Q14106 344 aaPredicted RBP14.33□□□□□ -0.12
SNU13-201ENST00000215956 C7orf61Q8IZ16 206 aa14.33□□□□□ -0.12
SNU13-201ENST00000215956 COA7Q96BR5 231 aa14.33□□□□□ -0.12
SNU13-201ENST00000215956 AGXT2Q9BYV1 514 aa14.33□□□□□ -0.12
SNU13-201ENST00000215956 KRT23Q9C075 422 aa14.33□□□□□ -0.12
SNU13-201ENST00000215956 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.33□□□□□ -0.12
SNU13-201ENST00000215956 ARMT1Q9H993 441 aa14.33□□□□□ -0.12
SNU13-201ENST00000215956 LOC285556D6RIA3 1793 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 FOXP2O15409 715 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 LDHBP07195 334 aaKnown RBP14.32□□□□□ -0.12
SNU13-201ENST00000215956 ME3Q16798 604 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 STOX1Q6ZVD7 989 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 CCDC83Q8IWF9 413 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 DEFB123Q8N688 67 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 ANKRD13CQ8N6S4 541 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 NSUN4Q96CB9 384 aaKnown RBP14.32□□□□□ -0.12
SNU13-201ENST00000215956 LLPHQ9BRT6 129 aaKnown RBP14.32□□□□□ -0.12
SNU13-201ENST00000215956 MTA3Q9BTC8 594 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 CRNKL1Q9BZJ0 848 aaKnown RBP14.32□□□□□ -0.12
SNU13-201ENST00000215956 TPCN1Q9ULQ1 816 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 ATP6V1DQ9Y5K8 247 aa14.32□□□□□ -0.12
SNU13-201ENST00000215956 ATAD5Q96QE3 1844 aa14.31□□□□□ -0.12
SNU13-201ENST00000215956 BAG3O95817 575 aa14.31□□□□□ -0.12
SNU13-201ENST00000215956 LCORLQ8N3X6 602 aa14.31□□□□□ -0.12
SNU13-201ENST00000215956 ANKLE1Q8NAG6 615 aa14.31□□□□□ -0.12
SNU13-201ENST00000215956 ZNF274Q96GC6 653 aaPredicted RBP14.31□□□□□ -0.12
SNU13-201ENST00000215956 ZMYND8Q9ULU4 1186 aaPredicted RBP14.31□□□□□ -0.12
SNU13-201ENST00000215956 AGTPBP1Q9UPW5 1226 aa14.31□□□□□ -0.12
SNU13-201ENST00000215956 TRIM75PA6NK02 468 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 GSG1L2A8MUP6 293 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 DHX16O60231 1041 aaKnown RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 ENTPD3O75355 529 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 BRD1O95696 1058 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 MECOMQ03112 1051 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 FAM110CQ1W6H9 321 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 SKOR2Q2VWA4 1001 aaPredicted RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 Q7L0L9 218 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 ZSCAN29Q8IWY8 852 aaPredicted RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 TMEM87BQ96K49 555 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 IDI2Q9BXS1 227 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 TAF6LQ9Y6J9 622 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 DNAH12Q6ZR08 3092 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 PLXNB2O15031 1838 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 VCANP13611 3396 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 PRC1O43663 620 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 HMGCRP04035 888 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 SLC3A2P08195 630 aaKnown RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 HAND2P61296 217 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 HMGN5P82970 282 aaKnown RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 LRIT3Q3SXY7 679 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 MFSD6Q6ZSS7 791 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 SH3BP5LQ7L8J4 393 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 MB21D2Q8IYB1 491 aaPredicted RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 STAG1Q8WVM7 1258 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 BRF1Q92994 677 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 GTF3C6Q969F1 213 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 RIOK1Q9BRS2 568 aaKnown RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 ATP8A2Q9NTI2 1148 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.3□□□□□ -0.12
SNU13-201ENST00000215956 PNMA3Q9UL41 463 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 STXBP5LQ9Y2K9 1186 aa14.3□□□□□ -0.12
SNU13-201ENST00000215956 CTNND1O60716 968 aaKnown RBP14.29□□□□□ -0.12
SNU13-201ENST00000215956 PFKFB2O60825 505 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 EVCP57679 992 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 MAP3K10Q02779 954 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 SART3Q15020 963 aaKnown RBP14.29□□□□□ -0.12
SNU13-201ENST00000215956 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 TREML2Q5T2D2 321 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 AMOTL1Q8IY63 956 aa14.29□□□□□ -0.12
SNU13-201ENST00000215956 MIGA1Q8NAN2 632 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms